Pangenome Download

Download litchi genome assemblies, annotations, and population variant VCF files

Download Link Table

Click the corresponding Download button to obtain genome sequences, gene annotations, TE annotations, or population variant VCF files. File sizes are shown under each download link.

Litchi Genome Assemblies (25 genomes)

Genome sequences, gene annotations, and TE annotations for each assembly.

Genome id Accession Subpopulation Genome Gene annotation TE annotation

Population Variants (VCF)

Structural variation call sets across litchi accessions.

Group variant File VCF