TargetPrediction

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- Bulk Sequence Fetch
- Genomes
- Browse SRA Data
  - Litchi
  - Longan
  - Yellowhorn
  - Acer
  - Soapberry
  - Rambutan
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Quick Search

Supporting several different search modes:

1. input any gene ID to query the detailed information of the gene, including coordinates, sequence, conservative domain, swissprot functional annotation, etc.
2. Perform fuzzy search in all species according to arbitrary annotation information, such as MYB88, Auxin response factor, etc.
3. Fast BLAST alignment. Input nucleic acid sequence or protein sequence in the input box.

Target Prediction

On this page, the function of sRNA target gene prediction was provided. There are two modes: In the first mode, users input sRNA sequence in FASTA format, select a species to be analyzed, and then all genes of the species can be targeted prediction; In mode two, the user inputs the gene sequence in FASTA format, selects the species, and predicts all potential sRNA target sites of the sequence.
Click here for help

miRNA target gene prediction

Input miRNA sequences in fasta format:

Select species:

Litchi Longan Rambutan Yellowhorn Acer Soapberry

miRNA target site prediction

Input transcript in fasta format:

Select species:

Litchi Longan Rambutan Yellowhorn Acer Soapberry

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