Lychee (Litchi chinensis Sonn.) is an important tropical fruit tree species worldwide, and a valuable fruit for which the edible portion is an aril. Lychee is cultivated in over 20 countries, where it is an integral part of local economies. Its desirable characteristics include outstanding nutritional profile, exotic flavor and an appealing fruit color, making it one of the most attractive tropical or subtropical fruits on the international market. Lychee cultivars are classified into three groups based on the fruit maturation period: extremely early maturing cultivars (EEMC), early-to-intermediate-maturing cultivars (EMC) and late-maturing cultivars (LMC) (Hu et al., 2022).

GenusLitchi
Scientific NameLitchi chinensis
Chromosome Number15
Genome Size470 Mb
Gene Number31,896
CDS Number59,630
Download GenomeLitchi_chinensis.genome.fasta
Download GFF3 FileLitchi_chinensis.genome.gff3
Download exon SequenceLitchi_chinensis.exon.fasta
Download CDS SequenceLitchi_chinensis.cds.fasta
Download Protein SequenceLitchi_chinensis.pep.fasta
Download Promoter SequenceLitchi_chinensis.promoter.fasta

          Longan (Dimocarpus longan Lour.), an important subtropical fruit in the family Sapindaceae, is grown in more than 10 countries including Guangdong, Guangxi, Fujian, Sichuan, Yunnan, and Hainan. Longan is an edible drupe fruit and a source of traditional medicine with polyphenol-rich traits. Traditionally, longan leaves, flowers, fruit, and seeds all have been widely used as traditional Chinese medicines for several diseases, including leucorrhea, kidney disorders, allergies, cancer, diabetes, and cardiovascular disease, because they contain bioactive compounds such as phenolic acids, flavonoids, and polysaccharides (Lin et al., 2017; Wang et al., 2022).

GenusDimocarpus
Scientific NameDimocarpus longan
CultivarShi Xia
Chromosome Number15
Genome Size483 Mb
Gene Number37,142
CDS Number37,142
Download GenomeDimocarpus_longan_SX.genome.fasta
Download GFF3 FileDimocarpus_longan_SX.genome.gff3
Download exon SequenceDimocarpus_longan_SX.exon.fasta
Download CDS SequenceDimocarpus_longan_SX.cds.fasta
Download Protein SequenceDimocarpus_longan_SX.pep.fasta
Download Promoter SequenceDimocarpus_longan_SX.promoter.fasta
GenusDimocarpus
Scientific NameDimocarpus longan
CultivarJi Dan Ben
Chromosome Number15
Genome Size455.5 Mb
Gene Number40,353
CDS Number42,155
Download GenomeDimocarpus_longan_JDB.genome.fasta
Download GFF3 FileDimocarpus_longan_JDB.genome.gff3
Download exon SequenceDimocarpus_longan_JDB.exon.fasta
Download CDS SequenceDimocarpus_longan_JDB.cds.fasta
Download Protein SequenceDimocarpus_longan_JDB.pep.fasta
Download Promoter SequenceDimocarpus_longan_JDB.promoter.fasta
GenusDimocarpus
Scientific NameDimocarpus longan
CultivarHong He Zi
Chromosome Number15
Genome Size471.88 Mb
Gene Number39,282
CDS Number39,282
Download GenomeDimocarpus_longan_HHZ.genome.fasta
Download GFF3 FileDimocarpus_longan_HHZ.genome.gff3
Download CDS SequenceDimocarpus_longan_HHZ.cds.fasta
Download Protein SequenceDimocarpus_longan_HHZ.pep.fasta
Download Promoter SequenceDimocarpus_longan_HHZ.promoter.fasta

          Rambutan (Nephelium lappaceum L.) is a popular tropical fruit known for its refreshing flavor and exotic appearance. It is native to tropical lowland rain forest of Indonesia and Malaysia, and widely cultivated throughout the archipelago and Southeast Asia, Hawaii, Central America, Africa, and China. Rambutan is trioecious, and can be classified into three groups: male trees producing only staminate flowers, hermaphroditic trees functioning as female, and hermaphroditic trees producing both hermaphrodite and female flowers or hermaphrodite and male flowers (the most common type in cultivar selections). Rambutan fruit flesh is aril, which is delicious, nutritious, and rich in carbohydrates, vitamin C, calcium, and other minerals. The fruit is usually consumed fresh or preserved in syrup and canned (Zhang et al., 2021; Zheng et al., 2022).

GenusNephelium
Scientific NameNephelium lappaceum
CultivarBaoyan 7
Chromosome Number16
Genome Size363 Mb
Gene Number20,788
CDS Number20,788
Download GenomeRambutan_Baoyan7.genome.fasta
Download GFF3 FileRambutan_Baoyan7.genome.gff3
Download exon SequenceRambutan_Baoyan7.exon.fasta
Download CDS SequenceRambutan_Baoyan7.cds.fasta
Download Protein SequenceRambutan_Baoyan7.pep.fasta
Download Promoter SequenceRambutan_Baoyan7.promoter.fasta
GenusNephelium
Scientific NameNephelium lappaceum
CultivarR-162
Chromosome Number16
Genome Size397 Mb
Gene Number49957
CDS Number49957
Download GenomeRambutan_R-162.genome.fasta
Download GFF3 FileRambutan_R-162.genome.gff3
Download exon SequenceRambutan_R-162.exon.fasta
Download CDS SequenceRambutan_R-162.cds.fasta
Download Protein SequenceRambutan_R-162.pep.fasta
Download Promoter SequenceRambutan_R-162.promoter.fasta

          Yellowhorn (Xanthoceras sorbifolium Bunge), the single species of genus Xanthocera (Sapindaceae), is a deciduous shrub or small tree, naturally occurring on hills and slopes in Northern China [1–3]. Yellowhorn is resistant to cold, drought, and salinity [4, 5] and is of important ecological, economic, and pharmacological value. Yellowhorn is an andromonoecious plant that has both hermaphrodite and staminate flowers, and produces capsular fruits from hermaphrodite with seeds rich in oil (50–68% of kernel), which contains 85–93% unsaturated fatty acids, being especially remarkable in nervonic acid content. The stems and fruits of yellowhorn have been used in folk medicine in Inner Mongolia for the treatment of rheumatism, gout, and enuresis in children. Moreover, different yellowhorn tissues contain multiple bioactive compounds, including triterpenoid saponins, barringenol-like triterpenoids, which have been found to possess antitumor and anti-inflammatory activities, as well as potentiality against Alzheimer disease (Liang et al., 2019; Liu et al., 2021).

GenusXanthoceras
Scientific NameXanthoceras sorbifolium
CultivarWF18
Chromosome Number15
Genome Size439 Mb
Gene Number24,672
CDS Number24,672
Download GenomeXanthoceras_sorbifolium_WF18.genome.fasta
Download GFF3 FileXanthoceras_sorbifolium_WF18.genome.gff3
Download exon SequenceXanthoceras_sorbifolium_WF18.exon.fasta
Download CDS SequenceXanthoceras_sorbifolium_WF18.cds.fasta
Download Protein SequenceXanthoceras_sorbifolium_WF18.pep.fasta
Download Promoter SequenceXanthoceras_sorbifolium_WF18.promoter.fasta
GenusXanthoceras
Scientific NameXanthoceras sorbifolium
CultivarJGXP
Chromosome Number15
Genome Size470 Mb
Gene Number21,958
CDS Number21,958
Download GenomeXanthoceras_sorbifolium_JGXP.genome.fasta
Download GFF3 FileXanthoceras_sorbifolium_JGXP.genome.gff3
Download exon SequenceXanthoceras_sorbifolium_JGXP.exon.fasta
Download CDS SequenceXanthoceras_sorbifolium_JGXP.cds.fasta
Download Protein SequenceXanthoceras_sorbifolium_JGXP.pep.fasta
Download Promoter SequenceXanthoceras_sorbifolium_JGXP.promoter.fasta
GenusCardiospermum
Scientific NameCardiospermum halicacabum
Chromosome Number11
Genome Size338 Mb
Download GenomeCardiospermum_halicacabum.genome.fasta
Download GFF3 FileCardiospermum_halicacabum.genome.gff3
Download CDS SequenceCardiospermum_halicacabum.cds.fasta
Download Protein SequenceCardiospermum_halicacabum.pep.fasta
Download Promoter SequenceCardiospermum_halicacabum.promoter.fasta
speciesLink
Acer yangbiensesee more
Acer pseudosieboldianumsee more
Acer truncatumsee more
Acer catalpifoliumsee more
Acer saccharumsee more
Acer negundosee more

          Sapindus mukorossi, also known as soapberry tree, is a deciduous tree of the Sapindaceae family and is widely distributed in Southeast Asia, Japan, and southern and southwestern China. The fruit peel of S. mukorossi is rich in saponins (up to 10.76%) with physiological activities, such as antifungal, antidandruff and anti-itching activities [4, 5]. The seeds of S. mukorossi are rich in oil (up to 42.70%) with a high proportion of unsaturated fatty acids (up to 86.63%), rendering them ideal materials for developing biodiesel and coping with the energy crisis. With its richness in saponins in the peel and oil content in kernels, S. mukorossi has become an important industrial tree species that can provide multifunctional raw material for producing biological chemicals, biodiesel, and biomedicine (Xue et al., 2022).

GenusSapindus
Scientific NameSapindus mukorossi Gaertn.
Chromosome Number14
Genome Size432 Mb
Gene Number30,184
CDS Number30,184
Download GenomeSapindus_mukorossi.genome.fasta
Download GFF3 FileSapindus_mukorossi.genome.gff3
Download exon SequenceSapindus_mukorossi.exon.fasta
Download CDS SequenceSapindus_mukorossi.cds.fasta
Download Protein SequenceSapindus_mukorossi.pep.fasta
Download Promoter SequenceSapindus_mukorossi.promoter.fasta

          Balloon-vine (Cardiospermum halicacabum L.) has a wide distribution and is commonly found in tropical and subtropical regions, as well as in some temperate regions. Common in the eastern, southern and southwestern regions of China, mainly in Hainan, Guangdong, Guangxi, Taiwan and other regions, and rare in the north. Balloon-vine mainly grows in fields, shrubs, roadsides and forest edges. In Indian traditional medicine, the extract of the Balloon-vine is often used to treat rheumatism, neurological diseases, stiffness of limbs, fever and snake bites.

GenusCardiospermum
Scientific NameCardiospermum halicacabum L.
Chromosome Number11
Genome Size323 Mb
Gene Number26,056
CDS Number37,309
Download GenomeBalloon_vine.genome.fasta
Download GFF3 FileBalloon_vine.genome.gff3
Download exon SequenceBalloon_vine.exon.fasta
Download CDS SequenceBalloon_vine.CDS.fasta
Download Protein SequenceBalloon_vine.pep.fasta
Download Promoter SequenceBalloon_vine.Up2000.fasta