LITCHI DNA IDENTITY PLATFORM

Litchi Electronic ID Platform

A molecular identity page for litchi samples based on 25 InDel loci.
Example: 0110011011001111001010010101110011001101100010111110100111001011010001110111110001001010010011111001
Instructions
1. Download the file containing the 100 InDel loci information.
2. Download the Python script and use it to generate the 100-digit electronic ID.
3. Enter the 100-digit electronic ID and click “Search” to view the matching results.
cmd/terminal
> #Note: if the queried sample has no corresponding site in the VCF file, or if the genotype is ./., the output string will use . at that position
> python extract_sites.py all_sites.tsv your_vcf_file.vcf sample_name result.txt