Search Result
On this page, GENE INFORMATION displays basic Information about the Gene ID being queried, including the chromosome location, starting and ending locations, plus or minus chain Information, and swissprot functional annotations. In addition, the CDS sequence, protein sequence and promoter sequence of the gene are also shown, and download links are provided.
| GeneID | Chromosome | Start | End | strand | Descript |
| LITCHI021595 | Chr12 | 24295792 | 24300744 | - | "Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic " |
| Gene ID | Start | End | Accession | Domain | Type | Bit Score | E-value |
| LITCHI021595.m1 | 91 | 137 | PF13041.9 | PPR_2 | Repeat | 31.8 | 1.40E-07 |
| LITCHI021595.m1 | 94 | 122 | PF01535.23 | PPR | Repeat | 22.8 | 7.70E-05 |
| LITCHI021595.m1 | 197 | 220 | PF01535.23 | PPR | Repeat | 15.7 | 0.014 |
| LITCHI021595.m1 | 222 | 269 | PF13041.9 | PPR_2 | Repeat | 49.1 | 5.30E-13 |
| LITCHI021595.m1 | 223 | 270 | PF13812.9 | PPR_3 | Repeat | 17.8 | 0.0028 |
| LITCHI021595.m1 | 225 | 255 | PF01535.23 | PPR | Repeat | 33.8 | 2.50E-08 |
| LITCHI021595.m1 | 298 | 332 | PF13812.9 | PPR_3 | Repeat | 16.6 | 0.0068 |
| LITCHI021595.m1 | 299 | 324 | PF01535.23 | PPR | Repeat | 27.1 | 3.30E-06 |
| LITCHI021595.m1 | 323 | 351 | PF12854.10 | PPR_1 | Repeat | 24 | 2.50E-05 |
| LITCHI021595.m1 | 324 | 371 | PF13041.9 | PPR_2 | Repeat | 42.6 | 5.50E-11 |
| LITCHI021595.m1 | 324 | 370 | PF13812.9 | PPR_3 | Repeat | 19.5 | 0.00086 |
| LITCHI021595.m1 | 326 | 356 | PF01535.23 | PPR | Repeat | 29.5 | 5.70E-07 |
| LITCHI021595.m1 | 347 | 406 | PF13812.9 | PPR_3 | Repeat | 16.6 | 0.0066 |
| LITCHI021595.m1 | 398 | 418 | PF01535.23 | PPR | Repeat | 9.3 | 1.5 |
| LITCHI021595.m1 | 441 | 503 | PF20431.1 | E_motif | Repeat | 74.4 | 7.00E-21 |
| LITCHI021595.m1 | 464 | 493 | PF01535.23 | PPR | Repeat | 18 | 0.0027 |
| LITCHI021595.m1 | 540 | 616 | PF14432.9 | DYW_deaminase | Domain | 89.5 | 9.70E-26 |
| LITCHI021595.m1 | 689 | 777 | PF03101.18 | FAR1 | Domain | 99.7 | 1.20E-28 |
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>LITCHI021595.m1 ATGGGTTGTTACACAATGACAGTTGTAGGACACTCAATTTACCCGCAAATTCCGAATTCC AGACCTAATAGTATATCACACAGAAAGCAGACCATCTCTCTACTGCAGAAATGCAAACAC ATCAACCAAATCCAATCCGTACACGCCAAAATCATTAGAGATGGCCATGAACACGATCCC TTTATCGTCTTCGAGCTTATTAAACTTTACTCCTCAAAATTCAACTCCATTGACTACGCT TCCTCGGTTTTTTACCACACTCATAACCAAAATGTGTACCTCTACACTTCTCTTATTAAT GGGTACGTGTTTTCGGGCTGTTACGTTGATGCTATTCGACTCTACTGTCGAATGGTTAGT GAATCTGTCGCGCCTGATAACTATGTTATCACTTCAGTGTTGAGGGCTTGTGGGGCTGTG CTGGCTCTGAGAGAGGGTAGGCAGGTTCATGGCCAGGTTTTGAAACTTGGGTTGAGGTCG AATAGATCGATAAGGTTGAAACTTGTGGAGTTTTATGGCAAGTGTAGCGAATTTAATGAC GCGGCACAGATGTTCGATGAAATGCATGAGTGCGATGTGGTTGCATCAACGGTTATGATG AATTGTTATTTTGATCATGGATTGGTTGAAAGAGCCATTGATGTTTTTAATCGGGTTGAG ATGAAGGACACGGTTTGTTGGACCGCGATGATTGATGGGTTGGTTAAGAATGGGGAGATG AGTAGAGCTTTGGGTGTGTTTAGAGAGATGCAAAGGGACAATGTGAGGCCTAATGAAGTT ACCGTTGTGTGTGTTTTATCTGCGTGTTCGCAAATGGGAGCGCTGGAGCTTGGGAGATGG GTTCATTCGTATGTGGGGAAGCATCGAATTGAGCTTAATCATTTTGTGGGAGGTGCTTTG ATCAATATGTACTCTAGGTGTGGTGACATTGATGAGGCGCAACAGGTTTTTGAAGAGATG AAGGAGAGGAATGCCATCACTTATAACTCAATAATTGTAGGGCTTGCCCTGCATGGGAGG GGCTTTGAAGCTATTGAGATGTTCCGTGAAATGCTCAAGCGAGGGCTAGAACCAAGTAGC GTTACCTTTGTTGGTGTGTTGAACGCTTGTAGTCATGGGGATTTGTTAGATTTGGGATTC GAGATCTTTCATTCTATGTTGAAAGATTATGGTATTAAGCCACAGATTGAGCATTATGGA TGCATGGTTGATCTTCTTGGACGTGTAGGGCGTCCTGAAGAGGCTTATGACTTCATCACG AGCAGGAAAATAAAACCAGACCATATCATGTTGGGGGCACTACTAAGTGCCTGTAAAATC CATGGAAACCTTGAGTTGGGAGAAAAGATTGCCAAAACATTGCTGGATTGCGAAAAAGCA GATTCCGGAACTTACACTCTTCTATCAAATGTGTATGCTTTGTCAGGGAAATGGGAAGAA GCTGCACAAATGAGAGTAAAAATGAAGGAAGCCGGAATCCAAAAGGAACCAGGCTGTAGC TCCATAGAAGTGAACAATGAGATTCATGAGTTCATTTTGGGAGACATTAGACACCCACAA AGGCAACAAATCTACAAAAAGTTACAAGAATTGAACCAAACACTAAAAGCCTCATATGGG TACTCCCCAGCAACAGAAACAGTCTTGCATGACATTGAAGAGAAGGACAAGGAATGGGCT CTAGCAATTCACAGTGAGAGGCTTGCAATTTGTTATGGCTTGATCTCAACCAAACCATTC ACTGCAATACGGGTTGTGAAAAATTTGAGGGTGTGCAATGATTGCCACTCCATGATCAAG CTCATAGCTAAGATCACCAAGAGAAAAATTGTTGTGAGGGATCATGGGGATTATGGGGTG ATTTCAGATTCTGCTGAAATGGAGCCTGTTGTTGATATAGATAGCAAGATGATAGAAAAT GTGGTTGGAAGTAACACTTGTATGTCTGAAGGTGGAGAAATGATTGACTTCTATGATGGG AGAGAGTTGATTGTGAATGAAATAAATGGGAGTGTGGAACTGTATGTGGGAATGGAGTTT GAATCAGAAGAGGCTGCCATGGTATACTATGATACTTATGCTAAGAATGTGGGGTTTATT ATTCGGGTTGGTAATTGTCATCGTTCGAGTCGGGATGGATCAATTGTCAGCCGTAGGTTT CTTTGTAATAAAGAAGGGTTTCGTGTAAATAACAAGAAGGCCAAAAGCCTTGAGGTAAGA AAGCCAAGGGAAGTCACTAGGGAGGGTTGCAAGGCAATGATTATGGTGAGAAGGGAGAAG TCAGGGAAATGGGTTGTTACTAAGCTTGAAACAGAACATAGTCATCCGCTAGGAATTCAT TCTGGCAAGGGTCGTCGAGATACAGTTCAGGCCCGACCACAGGATGAGAAGGATAAGAAA ATCCGGGAGCTATCATTAGAGCTCAATCGCGCAAATCAACAATTGGCAAAGTGCCGGGGG CAATTGGATATGGTTTTGAAAGACATTGAACAGCACACAAATCACCTTTCGCAAAGTATT CAGAACATTATTGAGAATGTAAGGGAAGTTGAAGCTGAAGAGTTGGATCAATAG
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>LITCHI021595.m1 MGCYTMTVVGHSIYPQIPNSRPNSISHRKQTISLLQKCKHINQIQSVHAKIIRDGHEHDP FIVFELIKLYSSKFNSIDYASSVFYHTHNQNVYLYTSLINGYVFSGCYVDAIRLYCRMVS ESVAPDNYVITSVLRACGAVLALREGRQVHGQVLKLGLRSNRSIRLKLVEFYGKCSEFND AAQMFDEMHECDVVASTVMMNCYFDHGLVERAIDVFNRVEMKDTVCWTAMIDGLVKNGEM SRALGVFREMQRDNVRPNEVTVVCVLSACSQMGALELGRWVHSYVGKHRIELNHFVGGAL INMYSRCGDIDEAQQVFEEMKERNAITYNSIIVGLALHGRGFEAIEMFREMLKRGLEPSS VTFVGVLNACSHGDLLDLGFEIFHSMLKDYGIKPQIEHYGCMVDLLGRVGRPEEAYDFIT SRKIKPDHIMLGALLSACKIHGNLELGEKIAKTLLDCEKADSGTYTLLSNVYALSGKWEE AAQMRVKMKEAGIQKEPGCSSIEVNNEIHEFILGDIRHPQRQQIYKKLQELNQTLKASYG YSPATETVLHDIEEKDKEWALAIHSERLAICYGLISTKPFTAIRVVKNLRVCNDCHSMIK LIAKITKRKIVVRDHGDYGVISDSAEMEPVVDIDSKMIENVVGSNTCMSEGGEMIDFYDG RELIVNEINGSVELYVGMEFESEEAAMVYYDTYAKNVGFIIRVGNCHRSSRDGSIVSRRF LCNKEGFRVNNKKAKSLEVRKPREVTREGCKAMIMVRREKSGKWVVTKLETEHSHPLGIH SGKGRRDTVQARPQDEKDKKIRELSLELNRANQQLAKCRGQLDMVLKDIEQHTNHLSQSI QNIIENVREVEAEELDQ.
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>LITCHI021595.m1 ATGGGTTGTTACACAATGACAGTTGTAGGACACTCAATTTACCCGCAAATTCCGAATTCC AGACCTAATAGTATATCACACAGAAAGCAGACCATCTCTCTACTGCAGAAATGCAAACAC ATCAACCAAATCCAATCCGTACACGCCAAAATCATTAGAGATGGCCATGAACACGATCCC TTTATCGTCTTCGAGCTTATTAAACTTTACTCCTCAAAATTCAACTCCATTGACTACGCT TCCTCGGTTTTTTACCACACTCATAACCAAAATGTGTACCTCTACACTTCTCTTATTAAT GGGTACGTGTTTTCGGGCTGTTACGTTGATGCTATTCGACTCTACTGTCGAATGGTTAGT GAATCTGTCGCGCCTGATAACTATGTTATCACTTCAGTGTTGAGGGCTTGTGGGGCTGTG CTGGCTCTGAGAGAGGGTAGGCAGGTTCATGGCCAGGTTTTGAAACTTGGGTTGAGGTCG AATAGATCGATAAGGTTGAAACTTGTGGAGTTTTATGGCAAGTGTAGCGAATTTAATGAC GCGGCACAGATGTTCGATGAAATGCATGAGTGCGATGTGGTTGCATCAACGGTTATGATG AATTGTTATTTTGATCATGGATTGGTTGAAAGAGCCATTGATGTTTTTAATCGGGTTGAG ATGAAGGACACGGTTTGTTGGACCGCGATGATTGATGGGTTGGTTAAGAATGGGGAGATG AGTAGAGCTTTGGGTGTGTTTAGAGAGATGCAAAGGGACAATGTGAGGCCTAATGAAGTT ACCGTTGTGTGTGTTTTATCTGCGTGTTCGCAAATGGGAGCGCTGGAGCTTGGGAGATGG GTTCATTCGTATGTGGGGAAGCATCGAATTGAGCTTAATCATTTTGTGGGAGGTGCTTTG ATCAATATGTACTCTAGGTGTGGTGACATTGATGAGGCGCAACAGGTTTTTGAAGAGATG AAGGAGAGGAATGCCATCACTTATAACTCAATAATTGTAGGGCTTGCCCTGCATGGGAGG GGCTTTGAAGCTATTGAGATGTTCCGTGAAATGCTCAAGCGAGGGCTAGAACCAAGTAGC GTTACCTTTGTTGGTGTGTTGAACGCTTGTAGTCATGGGGATTTGTTAGATTTGGGATTC GAGATCTTTCATTCTATGTTGAAAGATTATGGTATTAAGCCACAGATTGAGCATTATGGA TGCATGGTTGATCTTCTTGGACGTGTAGGGCGTCCTGAAGAGGCTTATGACTTCATCACG AGCAGGAAAATAAAACCAGACCATATCATGTTGGGGGCACTACTAAGTGCCTGTAAAATC CATGGAAACCTTGAGTTGGGAGAAAAGATTGCCAAAACATTGCTGGATTGCGAAAAAGCA GATTCCGGAACTTACACTCTTCTATCAAATGTGTATGCTTTGTCAGGGAAATGGGAAGAA GCTGCACAAATGAGAGTAAAAATGAAGGAAGCCGGAATCCAAAAGGAACCAGGCTGTAGC TCCATAGAAGTGAACAATGAGATTCATGAGTTCATTTTGGGAGACATTAGACACCCACAA AGGCAACAAATCTACAAAAAGTTACAAGAATTGAACCAAACACTAAAAGCCTCATATGGG TACTCCCCAGCAACAGAAACAGTCTTGCATGACATTGAAGAGAAGGACAAGGAATGGGCT CTAGCAATTCACAGTGAGAGGCTTGCAATTTGTTATGGCTTGATCTCAACCAAACCATTC ACTGCAATACGGGTTGTGAAAAATTTGAGGGTGTGCAATGATTGCCACTCCATGATCAAG CTCATAGCTAAGATCACCAAGAGAAAAATTGTTGTGAGGGATCATGGGGATTATGGGGTG ATTTCAGATTCTGCTGAAATGGAGCCTGTTGTTGATATAGATAGCAAGATGATAGAAAAT GTGGTTGGAAGTAACACTTGTATGTCTGAAGGTGGAGAAATGATTGACTTCTATGATGGG AGAGAGTTGATTGTGAATGAAATAAATGGGAGTGTGGAACTGTATGTGGGAATGGAGTTT GAATCAGAAGAGGCTGCCATGGTATACTATGATACTTATGCTAAGAATGTGGGGTTTATT ATTCGGGTTGGTAATTGTCATCGTTCGAGTCGGGATGGATCAATTGTCAGCCGTAGGTTT CTTTGTAATAAAGAAGGGTTTCGTGTAAATAACAAGAAGGCCAAAAGCCTTGAGGTAAGA AAGCCAAGGGAAGTCACTAGGGAGGGTTGCAAGGCAATGATTATGGTGAGAAGGGAGAAG TCAGGGAAATGGGTTGTTACTAAGCTTGAAACAGAACATAGTCATCCGCTAGGAATTCAT TCTGGCAAGGGTCGTCGAGATACAGTTCAGGCCCGACCACAGGATGAGAAGGATAAGAAA ATCCGGGAGCTATCATTAGAGCTCAATCGCGCAAATCAACAATTGGCAAAGTGCCGGGGG CAATTGGATATGGTTTTGAAAGACATTGAACAGCACACAAATCACCTTTCGCAAAGTATT CAGAACATTATTGAGAATGTAAGGGAAGTTGAAGCTGAAGAGTTGGATCAATAG
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>LITCHI021595.m1 - Up_Stream_Len 2000 GTTTCTAGCCACTGGACCCCCAAAACAACCTGGCACGCGGCAACTGGCAAAATGTAGAAG TCGGCTAGGATTGGATGATTCTGTATAAGTAGCTGTAACTTCAAACACCTTCCTGTGCAT TCCAGCTTTTCCCCGTTTCCCACCATGACCTGAAAAGATTGTCCTCGTTCCACAGGTAAT GCTAGTCGGTCCACCACAGCTTGATCGATAAAGTTATGGGTGCTTCCCCCATCAACCAAA ACAGTGACATCTTGGTTTTTAATTTTCCCAATCAAACGGAGGGTTTGCGGGTGACTCGTT CCCGCCATAGCGTGAAAGGAGATTTCAGGAAGCATTTGAGCCTCTGTCGGGTCTTCTTCA GCTGGTGGTTCTTCTTTGCTTTCGCCAAGCGCCAAATCTTCGATCATGAAAAGTTGTGGA CGCTGACATCGATGACCAGGGGTGTACTTCTCATCGCAGTAATAGCAGAGGCCCTTGTCT CGTCTCTCTCTCGCTTCCTGGCCAGAAATTCTTCTTATGGGAGTAGTCGATATGGTGGTT GTCTTCGGATTGGGAGAAGGTCCCAAGAGTCCTGCCGTGGTACTGCTCTGGCCTCTTTGG AAAAGGTTGGTGGACGTAGGCCGATAAGGAGCATTGTTACTAGGTTTCTTCTGTAGTGAA TTGCGTTCCTCTACCAATCGAGCTACACCAATGGCATCTGACAGGGTCTTTGGTTGTTTG ATCTTGACATCCAGCCTTACCTCATCACGCAACCCGACAATGAAACATCCTACCAAGAAT GGTTCAGGCAAATGGTCTACCCGATGGGATAGCCTCTCGAAGGCCTCCTGGTATGAAGAC ACTGTCGACGTTTGCTTGAGTCTCGTTAATGCCTCTGAGGGATCCTCGTAATCAGTAGGT CCAAATCGAAGGTGCACCGCTTTTGTGAACTCCTCCCAAGTTAGTGGTCCTCTGAATTTG GCCAACCAACGGTGCCATTGTAGTGCTATACCCTCAAGGTGGAAGGATGCCAACTGGACT CTTTGTTCTGGAGGGATGCTCTTGAAATCAAAAAACTGCTCTGCTTTGTATACCCAGCCG GTTGGATCGTCGCCATTGAAGGTTGGAAATTGTAGCTTCAAGTGGTGGGTTCGGTCTAGT ATAGGGGCAGAGGAAGTGGGGGCAGTTTGCGTATGTTGGTGGGATGATTCGGTTTGGGCA AAAGGATTTTCAGAGTCTATTGGGCTGGAAGTTTGGGACATCCGTAAACTTTGAAGATCG GTCATTATGGTCTGCATGGCAGCGTTGAGCTGGCTGAAACTAGCTTCGTGTCGCTGTAGA ATATCTGTTACTTCCGTTCGAAACTCAGCGTTCGACTTAGCACGGGTATCCATTGAAGCA AACCAGGCTCTGATACCAAATGATGAAGTAATTTATGCACAGAATTTAGTAAGAAAGGAG AAGAGAATGAGTGGGGAGGAAAGTTTCTGATTTTATTCAACATAATCCAAACAAACATCT ACTGGTCCTATTAATAGACCTGAACATTGCAACTGAAACTATAAAATAGGAGAAACTGAA ACTATAAAATGATAACATGTCGTGGCCGAGATGCACGCCACCTCCTACAGTTATTCAAGA CTGCTCCAACTAACCCATCCTATCTTCCCCTACCTGAATGGTTTACATACGCTGCATGGC ACACATTCATTGCATGAATTGCATGAGCCTAGTTGGACCTTTAACCATATCATATTTTAG TATTGATTTTAAACTGGTGTCCAAATATATAACATGTAACGGAAGCAATTAAACCAAGGT GCACGCTCCCATTATTTTTTATACAAAAGAGACATAAATCAGTTACTAATTTATTTGTAA CCCATGTCAGTTTAGAGTGATCCAAAAAATTATATTAGAATAACTAACAACATCAGATGT TATGATACACAAAAATAAAAGTCACACAGCCGGAATCAGAGAACTGACTTAGAGGCCCAA TACCAGAATTAGGCGCCAAA
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>LITCHI028786.m1 GenomeSequence + ATGAATTCCCTTCTTAGAGAAAATTCAGAGAATCAAGCACGCACCTATCCTTGCCTCTAT TGCAACAAGGTGTTCACTAACTACCGAGCCCTTGGGGGCCATAATAAGGCTCATAATGTG CAAATTAGATCAAGCACGAGAAGGGATTATCTTACTCGTTCCAAAACTAGCACCAGTCTT AATCCGCTCTCCAACAACCAGCCAGAAAATTCTTCCAAGGGAGTTGGAAACAATCAAACT ATATTTATGAGATCCTATCAAAATGATACCACCTCGATGAATGCAAGTAAGTTATCATAA AATTCAGCCTTAAAAACACCAAAACTCAATTTATTATATCATCTAGTCTTATATTTGTTA AAGGTTGCAATGAAATTTACATTTCTAACTATTTATCATCAACAGCATTTTCTCCATTTG CTAGACGTGCAGCCACCAGTTACCCCTCAGATCCTAAATTATTTTTGGGCTCAAATGAGG TTTGTCAGTTCAATACTGACGAGAAGCGAATATGCCGAGATGGTAGGCCGTTATTTTGTG AAGATGACTTGGAGGACTCTTCGCTCAATCCTAGTATTCCAGTTCCTAATCCAAGTTTTG GTCTTGACTTAAATGAATCACCAAGCTTCAAAGAAACTGATATTGTTGCTTCCTCTCTGG TTAATCCTTGTCCATTTTCAGGTTGGGATCAAAATTGTCAGCCTAAGATACAAAGTTTTA CGTTTTCTGAAGAGCATAAGGCACTGTACTCAGTTGATGCTTCTGCTGATACTGCCACCA TAAGAGCATCGAAAAGGCATAAGATTGTCCTTCCCATGCCTATGAATACAAAGAAGTCTT TGATCAAAGAACCACCTATTTTTAAGGATGTAAAAGACCAATTTACTGAATCAGGGATTT CATTTGATGCTGAACAGGAGGGTCCATCAGACATAGACCTATCTCTACATCTGTAG