Search Result
On this page, GENE INFORMATION displays basic Information about the Gene ID being queried, including the chromosome location, starting and ending locations, plus or minus chain Information, and swissprot functional annotations. In addition, the CDS sequence, protein sequence and promoter sequence of the gene are also shown, and download links are provided.
| GeneID | Chromosome | Start | End | strand | Descript |
| LITCHI016635 | Chr1 | 38392976 | 38395793 | + | Zinc finger CCCH domain-containing protein 39 |
| Gene ID | Start | End | Accession | Domain | Type | Bit Score | E-value |
| LITCHI016635.m1 | 89 | 113 | PF00642.27 | zf-CCCH | Family | 31.5 | 1.30E-07 |
| LITCHI016635.m1 | 93 | 113 | PF14608.9 | zf-CCCH_2 | Domain | 15.4 | 0.023 |
| LITCHI016635.m1 | 160 | 183 | PF00642.27 | zf-CCCH | Family | 29.1 | 7.30E-07 |
| LITCHI016635.m1 | 162 | 183 | PF18044.4 | zf-CCCH_4 | Domain | 29.6 | 4.50E-07 |
| LITCHI016635.m1 | 164 | 183 | PF14608.9 | zf-CCCH_2 | Domain | 17.1 | 0.0065 |
| LITCHI016635.m1 | 236 | 261 | PF00642.27 | zf-CCCH | Family | 34.5 | 1.50E-08 |
| LITCHI016635.m1 | 241 | 260 | PF14608.9 | zf-CCCH_2 | Domain | 19.2 | 0.0015 |
| LITCHI016635.m2 | 89 | 113 | PF00642.27 | zf-CCCH | Family | 31.5 | 1.30E-07 |
| LITCHI016635.m2 | 93 | 113 | PF14608.9 | zf-CCCH_2 | Domain | 15.4 | 0.023 |
| LITCHI016635.m2 | 160 | 183 | PF00642.27 | zf-CCCH | Family | 29.1 | 7.30E-07 |
| LITCHI016635.m2 | 162 | 183 | PF18044.4 | zf-CCCH_4 | Domain | 29.6 | 4.50E-07 |
| LITCHI016635.m2 | 164 | 183 | PF14608.9 | zf-CCCH_2 | Domain | 17.1 | 0.0065 |
| LITCHI016635.m2 | 236 | 261 | PF00642.27 | zf-CCCH | Family | 34.5 | 1.50E-08 |
| LITCHI016635.m2 | 241 | 260 | PF14608.9 | zf-CCCH_2 | Domain | 19.2 | 0.0015 |
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>LITCHI016635.m1 ATGAGTTTTTCCGATCCAAACCCTTCATTTTTGGCGGCACAATCTCAGCCGTATGCCGTT GGCAGTGATGCCGTTGGTGTCTGGCCTCAGTTCTCTATGAACAATGAACAACAATGTGAC ACACATTCACAATTTGATCAACAGCCTCCTTTTAAGAAGCCTAGAAACTATGAAGAGAAT CAATCAAACCCTTCTCTGTATCCACCTAGGACCAACAAGCAACCTATGAACCCTCCAATC AATAAAGGGCCAACCAACATTTTCTTCAAGACCCGTATATGTGCAAAATTTAAGCAGGGT GCTTGTAGAAACGGCGAAAGTTGTAACTTTGCACATGGTCTGGAGGACCTGAGGCAGCCT CCTCCCAATTGGCAAGAGCTTGTAGGTGGTGGTGGTGGTGGTGCCGGCAGTGGCCGTGTC GAGGAAGATCATCGACCCTCTGGCTCTAATTGGGATGATGATCAGAAGATAATCCATAAG ATGAAGCTATGCAAGAAGTTTTATAATGGAGAGGATTGCCCTTATGGTGATAGGTGTAAT TTTCTTCATGAAGATCCATCCAAATTTAGGGATGATTTAGGGAGGTACAGGGAGAGCTCA GCTATAAGCATTGGGACTACAGGACCAACAGTGGTGACTGGAGCAGGTTCTAATCAATCC GAAGTTAATAGGCCTGCAAACAACGCAATTGTAAAACCTGTCTATTGGAAGACAAAGCTG TGTATCAAGTGGACAACTGGCCAATGCCCTTTCGGAGAAAAATGCCACTTTGCTCACGGT GAAGCAGAATTGCAGGTACTTGCTGGACGCATTGAAGGGGAAGCAGGGAACACAGGTTTT GTTCCGACAAAACCTCAGTTTGTTTCTGCTAATGATGCATCTCCCTGTAAGTCAGTGACT TTGCCTACTTTGAGCAAGGAAGGTCAAGGCAAGAAGTGCTTATTCAAGTTGAAAAGACCC AAGAAAATCAATCGGATTTATGGAGATTGGCTTGATGATATGCCATTAGTGCACAACCTG CCAAGCCAAGTGGAAAGCTGA >LITCHI016635.m2 ATGAGTTTTTCCGATCCAAACCCTTCATTTTTGGCGGCACAATCTCAGCCGTATGCCGTT GGCAGTGATGCCGTTGGTGTCTGGCCTCAGTTCTCTATGAACAATGAACAACAATGTGAC ACACATTCACAATTTGATCAACAGCCTCCTTTTAAGAAGCCTAGAAACTATGAAGAGAAT CAATCAAACCCTTCTCTGTATCCACCTAGGACCAACAAGCAACCTATGAACCCTCCAATC AATAAAGGGCCAACCAACATTTTCTTCAAGACCCGTATATGTGCAAAATTTAAGCAGGGT GCTTGTAGAAACGGCGAAAGTTGTAACTTTGCACATGGTCTGGAGGACCTGAGGCAGCCT CCTCCCAATTGGCAAGAGCTTGTAGGTGGTGGTGGTGGTGGTGCCGGCAGTGGCCGTGTC GAGGAAGATCATCGACCCTCTGGCTCTAATTGGGATGATGATCAGAAGATAATCCATAAG ATGAAGCTATGCAAGAAGTTTTATAATGGAGAGGATTGCCCTTATGGTGATAGGTGTAAT TTTCTTCATGAAGATCCATCCAAATTTAGGGATGATTTAGGGAGGTACAGGGAGAGCTCA GCTATAAGCATTGGGACTACAGGACCAACAGTGGTGACTGGAGCAGGTTCTAATCAATCC GAAGTTAATAGGCCTGCAAACAACGCAATTGTAAAACCTGTCTATTGGAAGACAAAGCTG TGTATCAAGTGGACAACTGGCCAATGCCCTTTCGGAGAAAAATGCCACTTTGCTCACGGT GAAGCAGAATTGCAGGTACTTGCTGGACGCATTGAAGGGGAAGCAGGGAACACAGGTTTT GTTCCGACAAAACCTCAGTTTGTTTCTGCTAATGATGCATCTCCCTGTAAGTCAGTGACT TTGCCTACTTTGAGCAAGGAAGGTCAAGGCAAGAAGTGCTTATTCAAGTTGAAAAGACCC AAGAAAATCAATCGGATTTATGGAGATTGGCTTGATGATATGCCATTAGTGCACAACCTG CCAAGCCAAGTGGAAAGCTGA
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>LITCHI016635.m1 MSFSDPNPSFLAAQSQPYAVGSDAVGVWPQFSMNNEQQCDTHSQFDQQPPFKKPRNYEEN QSNPSLYPPRTNKQPMNPPINKGPTNIFFKTRICAKFKQGACRNGESCNFAHGLEDLRQP PPNWQELVGGGGGGAGSGRVEEDHRPSGSNWDDDQKIIHKMKLCKKFYNGEDCPYGDRCN FLHEDPSKFRDDLGRYRESSAISIGTTGPTVVTGAGSNQSEVNRPANNAIVKPVYWKTKL CIKWTTGQCPFGEKCHFAHGEAELQVLAGRIEGEAGNTGFVPTKPQFVSANDASPCKSVT LPTLSKEGQGKKCLFKLKRPKKINRIYGDWLDDMPLVHNLPSQVES. >LITCHI016635.m2 MSFSDPNPSFLAAQSQPYAVGSDAVGVWPQFSMNNEQQCDTHSQFDQQPPFKKPRNYEEN QSNPSLYPPRTNKQPMNPPINKGPTNIFFKTRICAKFKQGACRNGESCNFAHGLEDLRQP PPNWQELVGGGGGGAGSGRVEEDHRPSGSNWDDDQKIIHKMKLCKKFYNGEDCPYGDRCN FLHEDPSKFRDDLGRYRESSAISIGTTGPTVVTGAGSNQSEVNRPANNAIVKPVYWKTKL CIKWTTGQCPFGEKCHFAHGEAELQVLAGRIEGEAGNTGFVPTKPQFVSANDASPCKSVT LPTLSKEGQGKKCLFKLKRPKKINRIYGDWLDDMPLVHNLPSQVES.
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>LITCHI021914.m1 GAAGAAGTCTTCAGTTCCATGAGTCAGAAAAAGAGAAAAGAAAAAACAACCAACCAAAGC CACCATCAAAGGATGATCATCGAATTCGTACACAATCAAAACCCCACTTCAAAGTCTTCT GTTGTCAATTTGAATTATTGTATCTGCAAATACCACATATATTCCCACTCACAAATAAAA TAATATCTAAATAATATACCACATTACATGTATAGTAGTATTAAATTAGACAAAATATAA AATAAAATAAAACCACCCCATCTCTCTCTCTCTCTCTCTCTCTCATGTACACTCACAGCA CATAAAGCAAGGTGTGTGATAGATACATACATTGGAAGTCCATACGCAAAAATCCATCAC AAACATTCCTTTTCCTGCTTTTAAAACCAGTTTCAAGAAAAGTGCTTGTTTCTCTCTCTC ACTAGATACCATTTTCCCCTCTTGATCTCCTTCTTCAGTTTCATATCCATGGATACTGCT CAGTGGCCACAGGAGATTGTGGTGAAGCCTATAGAAGAGATAGTCACAAACACTACATGT CCAAAGCCACCTGCAGCAACTGCTAGTTTAGAAAGGAAGGCAAGGCCTCAAAAGGAGCAA GCTTTGAACTGTCCCAGGTGCAATTCATCCAACACCAAGTTCTGTTACTACAACAACTAC AGCCTCACACAACCAAGGTACTTTTGCAAGACCTGTAGAAGGTACTGGACTGAGGGAGGA TCTCTTAGGAACATTCCTGTGGGTGGTGGTTCAAGGAAGAACAAGAGATCATCAACATCA TCATCAGCATCATCATCACTATCGTCAAGGACCAAGCTTCCTGATCTTGTCACCCCACCT AGTTTGTCTACTCATCAGAACCCTAAGATCCTTAATGAAGGGCAAGACCTCAACCTAGCC TTCCCAACAAGTCAAGGTTATAGAAGTATCTCTGAATTGGCTCAAGTACCCAATATTGAA AACAACAACAGCAACAACAACAACAAGAGCATCCAAATCTCTTCTTTGGAGTTGCTGACT GGGATATCTTCAAGAGGGTTGAATTCTTTCATGCCTATGCCAGTTCATCCAGATCCAAAC AGCACAGTTTACACACCTGGTTTCCCTATGCAAGACTTCAAACCAACCCTAAGTTTCTCT CTTGATGGACTTGGAAGTGGATATGGGAGTCTCCAAGGTGCTCAAGAGACTACTACTGGG AGGCTCTTGTTCCCATTTGAAGATTTGAAACAAGTCTCAAGCACAAGAAGTCATCATGAT ATTGATCATCAACAGAATAGAGAGCATGGAGATTCTTCAGGATACTGGACTGGAATGTTA GGTGGAGGATCATGGTAAACAAATATCATATGATGAAAGAAAAAAAATAATTGTCTGGGG GTTCCTTTTTTCCTTAATTTTTTTTTCTTTTTATGGGGTTTTTTTAACTTAATTTCTATT AATTTGTTAAGGTGGGGTGACTTGTTTGGATTTCTTCATTACTAACAGATCATCATCATA GGAGATAATACATGGGTTTCTTAAACTCTATCTTTTGCTTCTCTCATATCTATCCATCCT TAAATATATATCATCTTCTCTCTTCTCATTTGTTAATGGTGGGAATTTGAAGCTTATTTT AGGTTGGCTTCATGAGAATGAGTGACATGATCAGAAAATGAGTAATGATAGAAGTAGAAG ATGGCATTGATTGTTCAATGTGTACCCTTTATTTCATGTTCTATATATATATATATATAT ATATATATATGTTGTTATCCAGAAAGGAGCAGAAAGGGCAACCCAGTGCTATGTGTCATT GGTTAATTGGCTTGGTACAAAAAACTAAGTGTATAACGTGTAAGTTTGTAAGGAGTGGAA AAAAGAAAAAAAAATCTTTCATCAATTTAGTTAAACATTTTTAATATATATGGAAGCCTT CAATGGTTTCAAAAGGGTTTGTGTCCCATC
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>LITCHI021914.m1 + Up_Stream_Len 2000 ATAGAGTTTGATTTGTCTGTTGAAATAAGAGAAAAAAGAGAGAAATGAAACAACTTTTAT TATGGGTAAATTTGGAAGTTTACAATCTTAAGTACTCTTATAATTTAAGCTATTAATTCA GTGATAAATGTAAAAAAAGTGAATATATTTATAATATTTCACTTTATTTTCACTTTAAAA TATATTAGATGGACCGTGTGGTGCTTTATTGATATTTTATAATTGATTCGTGGAGAAATA TTGACTCTGGCTATTTTATGTTTATAATTTTGGGTTGAGCTTGGACAACACTTCTTTAGG AAACTTTATGATTAAGAATTTATATATCGTTTTGATTACACTGTATTGTTAGGAACTGAT ATTTGTAATAGGGTTGCATGATTGGACATAAATTTATATGGTTGTAAAATAAAATAAATT TATATAATGTAAAGCAAATTTTTTTGAGACACAATTAATATTTTTGCATGTGTTAAATAT TTTATCACACATATCGTACTACACAATTAATATTTTTGAATGTGTCCAATATATTATCAC ACATATCGTACTATTTATTTGTTGTGGTAGGGTTATAGACAAATATTGCATTCATGTATG CCATATTCGAACATAATTGATAATTCATATGTAATGAATTGTGTTATTGTTTGGTAATAG ATGTGACCATTGGTGGAACAAAATTGTTTCTACTATTTTGAATTTGCTTTTCTTGATCGG TTAATACCCGGAAAAAAGCTACATAATTGCAACAAGTGCTTTTACGAGCTTCATTGATAA AGCGCTTTTACTATAAGATCAATTTTGAATTAATGACATATCAGATCCTCTAATAAGCAT TTAAAGGGATTGGGAGTCTGGGACCCAAAAAAAGCAACTTTTTCTACTCCTTGAGTTGAT ACTGTTCGACGTCTATTAAAGTCTTGGTCTTGTTAATTTTTTTAAAAACTTGAGGGGATT TACCAAATTAATTACTACTTATATAGGTTTAATATTTAAGATAAACTACTTTCATAATAA GAATAAATTACTCTCCACATATGCTTATAAACCACATATGCATGGATATCTACTCATACA TTAAGAAGAGTTGTAAATAATTTTCTTTTAATGAAAATATTAATATGGTTAGTAAGAGCT TTTCTATAGTATGGACATCCAGATTATAATTTATTTATGCGCTGATGTTAAATTTACTCA TGCAAATAGATTAATTGAATTGTTTTTGATATTCACATATGTTAATAGTTATGTATAAAC TTGAATGTTTAGTTACATATATAAAAAAGAAATGCACAACAACTTGAGAAATAATTATAT TTTATACTATTTAGGATGATTATAATATGAGAATTTCTAGCTAATTAAAAAAAATTAGTT AACAGGACTTGGGCCAAAGAGTACTAACTATTTGTTCGATCTCTAATTAGGAGAAATTAA CAACTAAACTTTCCAAGATGTCTCAAACTAATTTAATAAAGTAAAAATACAGTGCAAATA TATACAAAGATATGAGACAGAAAAACATGAGAGAAGAAGTCTTCAGTTCCATGAGTCAGA AAAAGAGAAAAGAAAAAACAACCAACCAAAGCCACCATCAAAGGATGATCATCGAATTCG TACACAATCAAAACCCCACTTCAAAGTCTTCTGTTGTCAATTTGAATTATTGTATCTGCA AATACCACATATATTCCCACTCACAAATAAAATAATATCTAAATAATATACCACATTACA TGTATAGTAGTATTAAATTAGACAAAATATAAAATAAAATAAAACCACCCCATCTCTCTC TCTCTCTCTCTCTCTCATGTACACTCACAGCACATAAAGCAAGGTGTGTGATAGATACAT ACATTGGAAGTCCATACGCAAAAATCCATCACAAACATTCCTTTTCCTGCTTTTAAAACC AGTTTCAAGAAAAGTGCTTGTTTCTCTCTCTCACTAGATACCATTTTCCCCTCTTGATCT CCTTCTTCAGTTTCATATCC
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>LITCHI021914.m1 GenomeSequence + GAAGAAGTCTTCAGTTCCATGAGTCAGAAAAAGAGAAAAGAAAAAACAACCAACCAAAGC CACCATCAAAGGATGATCATCGAATTCGTACACAATCAAAACCCCACTTCAAAGTCTTCT GTTGTCAATTTGAATTATTGTATCTGCAAATACCACATATATTCCCACTCACAAATAAAA TAATATCTAAATAATATACCACATTACATGTATAGTAGTATTAAATTAGACAAAATATAA AATAAAATAAAACCACCCCATCTCTCTCTCTCTCTCTCTCTCTCATGTACACTCACAGCA CATAAAGCAAGGTGTGTGATAGATACATACATTGGAAGTCCATACGCAAAAATCCATCAC AAACATTCCTTTTCCTGCTTTTAAAACCAGTTTCAAGAAAAGTGCTTGTTTCTCTCTCTC ACTAGATACCATTTTCCCCTCTTGATCTCCTTCTTCAGTTTCATATCCATGGATACTGCT CAGTGGCCACAGGTACAGACACCAAGTTCATCATCATCTTCGTCAAAACTTTTAGCTTTT TCATGTGAAAAAAACACACAGGCACACAGAAGAAAAAGGCTTGAATTGTGTTTTGTATTG TTTTGTTCTTCTTTTCACAAAAAAGGACACCATCTATTGTGGTTGTGTGTGTTCATAGCT AGTGCAATAAGTCCCCACTCAATTAGGATTTATAGTTTTTATCTGTTCTTCAACATTTTT ATTTGCACTTATACACACACACACACACATATATATATATATATATCTTTAAACAAAAAG GGCTTCCTTTTTTCTCTTTTATCTTCTCCCTTTATGTTTGGGATGATATAATCTTGAAAC GTGTAAAGCAAATTCTATACCTCTTTGTTTTGTTTTGTTTGGTTTGGTTTGTTTGTATGT ATATGTTACATATGTTCTTTTTAATGTTCCATCTTTTTTATCTCTCAGAGCTCATCTTCT TTGTTTGATCTACAAATTATTGTTAAATTCTCTCTTGTCCTTCTCTCTGCTTCTTTTTTT TTTGCTATATTTGTAATTTGGAGTTCATCTCTTTTTAGGAGATTGTGGTGAAGCCTATAG AAGAGATAGTCACAAACACTACATGTCCAAAGCCACCTGCAGCAACTGCTAGTTTAGAAA GGAAGGCAAGGCCTCAAAAGGAGCAAGCTTTGAACTGTCCCAGGTGCAATTCATCCAACA CCAAGTTCTGTTACTACAACAACTACAGCCTCACACAACCAAGGTACTTTTGCAAGACCT GTAGAAGGTACTGGACTGAGGGAGGATCTCTTAGGAACATTCCTGTGGGTGGTGGTTCAA GGAAGAACAAGAGATCATCAACATCATCATCAGCATCATCATCACTATCGTCAAGGACCA AGCTTCCTGATCTTGTCACCCCACCTAGTTTGTCTACTCATCAGAACCCTAAGATCCTTA ATGAAGGGCAAGACCTCAACCTAGCCTTCCCAACAAGTCAAGGTTATAGAAGTATCTCTG AATTGGCTCAAGTACCCAATATTGAAAACAACAACAGCAACAACAACAACAAGAGCATCC AAATCTCTTCTTTGGAGTTGCTGACTGGGATATCTTCAAGAGGGTTGAATTCTTTCATGC CTATGCCAGTTCATCCAGATCCAAACAGCACAGTTTACACACCTGGTTTCCCTATGCAAG ACTTCAAACCAACCCTAAGTTTCTCTCTTGATGGACTTGGAAGTGGATATGGGAGTCTCC AAGGTGCTCAAGAGACTACTACTGGGAGGCTCTTGTTCCCATTTGAAGATTTGAAACAAG TCTCAAGCACAAGAAGTCATCATGATATTGATCATCAACAGAATAGAGAGCATGGAGATT CTTCAGGATACTGGACTGGAATGTTAGGTGGAGGATCATGGTAAACAAATATCATATGAT GAAAGAAAAAAAATAATTGTCTGGGGGTTCCTTTTTTCCTTAATTTTTTTTTCTTTTTAT GGGGTTTTTTTAACTTAATTTCTATTAATTTGTTAAGGTGGGGTGACTTGTTTGGATTTC TTCATTACTAACAGATCATCATCATAGGAGATAATACATGGGTTTCTTAAACTCTATCTT TTGCTTCTCTCATATCTATCCATCCTTAAATATATATCATCTTCTCTCTTCTCATTTGTT AATGGTGGGAATTTGAAGCTTATTTTAGGTTGGCTTCATGAGAATGAGTGACATGATCAG AAAATGAGTAATGATAGAAGTAGAAGATGGCATTGATTGTTCAATGTGTACCCTTTATTT CATGTTCTATATATATATATATATATATATATATATGTTGTTATCCAGAAAGGAGCAGAA AGGGCAACCCAGTGCTATGTGTCATTGGTTAATTGGCTTGGTACAAAAAACTAAGTGTAT AACGTGTAAGTTTGTAAGGAGTGGAAAAAAGAAAAAAAAATCTTTCATCAATTTAGTTAA ACATTTTTAATATATATGGAAGCCTTCAATGGTTTCAAAAGGGTTTGTGTCCCATC