Search Result
On this page, GENE INFORMATION displays basic Information about the Gene ID being queried, including the chromosome location, starting and ending locations, plus or minus chain Information, and swissprot functional annotations. In addition, the CDS sequence, protein sequence and promoter sequence of the gene are also shown, and download links are provided.
| GeneID | Chromosome | Start | End | strand | Descript |
| LITCHI008747 | Chr7 | 16153908 | 16156651 | - | B3 domain-containing transcription factor VRN1 |
| Gene ID | Start | End | Accession | Domain | Type | Bit Score | E-value |
| LITCHI008747.m1 | 12 | 102 | PF02362.24 | B3 | Family | 56 | 3.00E-15 |
| LITCHI008747.m1 | 282 | 364 | PF02362.24 | B3 | Family | 31.7 | 1.10E-07 |
| LITCHI008747.m2 | 180 | 262 | PF02362.24 | B3 | Family | 32.5 | 6.30E-08 |
| LITCHI008747.m3 | 180 | 262 | PF02362.24 | B3 | Family | 32.5 | 6.30E-08 |
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>LITCHI008747.m1 ATGGCTTCAAGGAGGAGAGTAGAACCCTCGCATTTCTTCAAGGTTATCCTGAGTTCCACT CTGGAAGACAAGAAGCTGAAAATTCCTGAAAAGTTTGTAAGGATATTCAGGGATGAACTC TCTACTGTAGCGACACTGACAGTTCCTAATGGTCGAGATTGGCAAGTGAGGTTGATAAAA GATGGGCGAAAGATTTGGTTCGATGATGGTTGGCATGACTTTGTAAAATGTAACTCAATC AGTACTGGGTACTTCGTGGTTTTCAAATATGGAAAGAATTCAAACTTTAAAGTTCTTATC TTTGATATGACTGCTTGCGAAATACAATACCCCTACAATGGTAAAGAACCAGAGAATGAC AAGCAGAACTCATTGCACCAGGATGAAAGTGAGGAAGAAGATTCTGTTGAGATAAAGGAC TTCACAACTCCAAACCCTACTTTTGACTCCCTGAAGAACAAAGCTTCTGCTAAATGTCTA AGGGTATCTAGCACAATGCCATCACATCTGAATCAGGCTAAGACTCCTTTTGATTCTGTT TTTGTGAGTCCAAAATTTAAGTGTGGTTGTGAGCCACAAAACAAGAGGCGTAAATTGGAA GAACCAGCGGAATCACATAAAGCAAATGCTGTAGGTATTGACTTAAATAGTAGGAAAACT GCAGCTGAAGTTGGAACACATTCTTCAGATGAAGCAACAGAAATTGATGAAGATGAGTTT ATGGATGTACTTGAAGAAATGGGAATATGCGTTAATAAGAGATTTAGAAGTCTTGCAGCT GAAGAAAGAGAGAGAGCAATTGCTGCTGCCAGATTGTTCAAGCCTAAAAATCCTTCATTC ATGGTCATCTTGCGGCCTTCTGACATTAGTCTTCGTCGCGTATATGTGCCTACCAATTTT TCTCACAAGTATCTAAGTAGGAATGACAAGGTTATCGAAGTACTGGATTCTGATGGAAGC AAGTGGTCCATGGCACTGGCTTGGATGCCTCGATGTTTTATAACAAAATTGGGAAATTTT GCAAAGAAGTTGGATGATGGAGATACCTGTGTCTTTGAGCTTATTAGAAGAAAAACACTA AAAGTTTCAGTGCTGAAGACTATGAAAAGTGAACTGTGGTGA >LITCHI008747.m2 ATGACTGCTTGCGAAATACAATACCCCTACAATGGTAAAGAACCAGAGAATGACAAGCAG AACTCATTGCACCAGGATGAAAGTGAGGAAGAAGATTCTGTTGAGATAAAGGACTTCACA ACTCCAAACCCTACTTTTGACTCCCTGAAGAACAAAGCTTCTGCTAAATGTCTAAGGGTA TCTAGCACAATGCCATCACATCTGAATCAGGCTAAGACTCCTTTTGATTCTGTTTTTGTG AGTCCAAAATTTAAGTGTGGTTGTGAGCCACAAAACAAGAGGCGTAAATTGGAAGAACCA GCGGAATCACATAAAGCAAATGCTGTAGGTATTGACTTAAATAGTAGGAAAACTGCAGCT GAAGTTGGAACACATTCTTCAGATGAAGCAACAGAAATTGATGAAGATGAGTTTATGGAT GTACTTGAAGAAATGGGAATATGCGTTAATAAGAGATTTAGAAGTCTTGCAGCTGAAGAA AGAGAGAGAGCAATTGCTGCTGCCAGATTGTTCAAGCCTAAAAATCCTTCATTCATGGTC ATCTTGCGGCCTTCTGACATTAGTCTTCGTCGCGTATATGTGCCTACCAATTTTTCTCAC AAGTATCTAAGTAGGAATGACAAGGTTATCGAAGTACTGGATTCTGATGGAAGCAAGTGG TCCATGGCACTGGCTTGGATGCCTCGATGTTTTATAACAAAATTGGGAAATTTTGCAAAG AAGTTGGATGATGGAGATACCTGTGTCTTTGAGCTTATTAGAAGAAAAACACTAAAAGTT TCAGTGCTGAAGACTATGAAAAGTGAACTGTGGTGA >LITCHI008747.m3 ATGACTGCTTGCGAAATACAATACCCCTACAATGGTAAAGAACCAGAGAATGACAAGCAG AACTCATTGCACCAGGATGAAAGTGAGGAAGAAGATTCTGTTGAGATAAAGGACTTCACA ACTCCAAACCCTACTTTTGACTCCCTGAAGAACAAAGCTTCTGCTAAATGTCTAAGGGTA TCTAGCACAATGCCATCACATCTGAATCAGGCTAAGACTCCTTTTGATTCTGTTTTTGTG AGTCCAAAATTTAAGTGTGGTTGTGAGCCACAAAACAAGAGGCGTAAATTGGAAGAACCA GCGGAATCACATAAAGCAAATGCTGTAGGTATTGACTTAAATAGTAGGAAAACTGCAGCT GAAGTTGGAACACATTCTTCAGATGAAGCAACAGAAATTGATGAAGATGAGTTTATGGAT GTACTTGAAGAAATGGGAATATGCGTTAATAAGAGATTTAGAAGTCTTGCAGCTGAAGAA AGAGAGAGAGCAATTGCTGCTGCCAGATTGTTCAAGCCTAAAAATCCTTCATTCATGGTC ATCTTGCGGCCTTCTGACATTAGTCTTCGTCGCGTATATGTGCCTACCAATTTTTCTCAC AAGTATCTAAGTAGGAATGACAAGGTTATCGAAGTACTGGATTCTGATGGAAGCAAGTGG TCCATGGCACTGGCTTGGATGCCTCGATGTTTTATAACAAAATTGGGAAATTTTGCAAAG AAGTTGGATGATGGAGATACCTGTGTCTTTGAGCTTATTAGAAGAAAAACACTAAAAGTT TCAGTGCTGAAGACTATGAAAAGTGAACTGTGGTGA
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>LITCHI000002.m1 ATAAAAGCTAGCTCGTCTAGGCCTGACATCTTTTATCTATAATAACAAACTTGATCCATA GACAAGGCTTCTTCAAAAAAAGTATTCAAGTTGCAGCTATATATGGAGATCTTCTCTAAA TTACTAACATCCACTGATGTTACTGATGGACTATTGATCCCAAAGGGGGCTCGGGCGCTG TTGCATATTCCGATACCAAATGGAGGTAGACACTACTACAAGTGTTTGGAGGTTAATGAC TGGATTGGTAAACCGTGGAAGTTCTACTTCTTCACTAACAGATTTGTTTTCACTAAAGGA TGGATTGAATATGTTCAAGAGAAAGGTGTTAGAGAAGGTGATAAAGTCATCTTCTCAGGG GACCAAGATGGAGCGAGTGGAGCAACACAATATAGTATTGTGGTGATGCGATCTCCTTTC ACTTTCCAAAATGAGCCTATTTATATGAATGTGGAAGAACTGCCAAGAGAAAGATTGCCA ATCCCTACTTTTGAGATTAATTTCTTCAAATAAATATATATATATATATATGAACACAAA AGATTGTTCGTTAATTTAAAGTCTTGCTTTATGTTTCTTTTTTTTTTTTTTGATTCATGC TTTATGTTTCATTTCCTAATGTATTTTTTCTTATTTCTGTTTCTTAATAAACTCTCGATA AGTGGAATGTTATATATACTTTTTTTTTAATAAAACGC
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>LITCHI000002.m1 + Up_Stream_Len 2000 AATTAATTTTGTTGTAAACTAATTCGTTAAAAGCCAGAAATATTTTGCCATGCAAGAATT ACATTTAATTAGATTCAACCTAACATATACGTAAGCCAAACTTTTTGTCTGAATAAAACA AAACAAAAGAAGATTGAGATTGGACTAAGCATGCATCTGGAATAGTTGATCATGATGTAA GACTAAGACCTCTGATATCACGGTTCGTAGCATTGTTTTTTCTTTGATTTCGATAGTTGG TAGAAATTGAACGATTTAATAAATAACGTGGGACCTTTGAAAACTATGTATTACTATTAT TAAGAACTTCGTTTTAGTTGTTTTAATTGTTATACATTAACAGATAAAAAGAAATTATTC CCATAGAAAGGCGATTGGCTTATTATGTTGTATAAGAGACTTAACCTGCAGGCGATTGAC TTATTATGTTGTATAAGAAACTTAACCTGCATTTCCAGCATGACATTGAAGGTTCCGATC TGATTATCATGTACATGACCATTAGTTTTATCGAAGCATCAAATCAGATAACAAATAAAT GTTTGGAAAAAAGAAGTTATAGCGACGGGATTCGAAATTATCAATCACATGAATATTTAC TCATTTGCACACTTTCTTTCATCTTTATGGTAAGGATTTAAGTTCCAATATAAATATTTG TCAACATATATAAGGAGTTATTTTTCTTATTATGGGAGTACATTTCTCCATTTATAATAA TAAATTTTCAGGTCACAAATAGAGTATTTAATCTGGATAAGTTCTAATAAATTCCAATCA TCATAGTGATGTCGGATTACAATTTAATTATGTTACATAGACAAATAAAAAGCAACCACA TTATATTATTTATATAATTATGTCAATTAATTGTTTTGTAACTCATGATCCATATTGTTC TTACCGTAACTCACGATTGAAGGCTGACTAAATCTTCATTAAGCTTTTTCAGTTTTTCCT TCAATGTTACTCTTCACCTTTGATTCTCCATTACAACTCAATTCTACAAAACAAATAACA CCTTCGTCAACATAACCTGGAGGTTATATCCGAAGCAACGTTTGATGCTTGAGTCAACTT GTTATTTTAAAAGACTCGTTTTTTCCTAAAAACTATCATCTCCCCCTCAAATAAACCATA TAACCACGTTTTATAAGAAAACAAGATGTATTTTTTGGGTGTCTTAATGCATGCCAAGAT GCTTATCATTTGTCATACATAATGTTCTTTGGATGTCAGGTGTTTGTCGCATGTCTCACA TATGTTGTTTATCTTTTTGAGGAACAGTTCCCCCAAAGGTCAATTTAATATGCTATCTAA TATCTTCTTCGTCAAAGTCTACAATATTTGCCATAGTCTTCTCCTAATTGCATTAACATG TCTTCTTTTCATTAGGTTTTTTTTGTACCCATACAAGTATCATGATTTATTTCATTTATC ATATTTTATATGAATTAAATTATTTGTAACATATCATATGAACTCAATTACAGTGCTGAT TATTAGGACACAACTTCGGATACTGTTATCTAATGTTACTATTATTCATATTTTAAGTAA ATATTGGCACAATAACATACTTTTCAGCAGCTCATCAATATTTCACCTATTTATGTTTTA GTTAACTGGACATTAAATGATTGAGTTCTTTCATAGTAGCTTCGGCTTCAGTTGGCAGAT GTGTTCCGACTACTTTTATTATAACTAATTATTCTGTCAACATCGCTGGAGAGCAATATT GTCTTGACCACGACAATATTGTCTTGATCAACCACGACACAAAATCCTTAGAACTTCTTG GAAAATATGGTCGCTTATAAAGTGAAACACAAGTACACTTTGGTCAACAAATAGATATTT GATCATCGTGTTTCAACTCATCTTAGCAAATTTGTGCTATAAAAGCTAGCTCGTCTAGGC CTGACATCTTTTATCTATAATAACAAACTTGATCCATAGACAAGGCTTCTTCAAAAAAAG TATTCAAGTTGCAGCTATAT
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>LITCHI000002.m1 GenomeSequence + ATAAAAGCTAGCTCGTCTAGGCCTGACATCTTTTATCTATAATAACAAACTTGATCCATA GACAAGGCTTCTTCAAAAAAAGTATTCAAGTTGCAGCTATATATGGAGATCTTCTCTAAA TTACTAACATCCACTGATGTTACTGATGGACTATTGATCCCAAAGGGGGCTCGGGCGCTG TTGCATATTCCGATACCAAATGGAGGTAGACACTACTACAAGTGTTTGGAGGTTAATGAC TGGATTGGTAAACCGTGGAAGTTCTACTTCTTCACTAACAGATTTGTTTTCACTAAAGGA TGGATTGAATATGTTCAAGAGAAAGGTGTTAGAGAAGGTGATAAAGTCATCTTCTCAGGG GACCAAGATGGAGCGAGTGGAGCAACACAATATAGTATTGTGGTGATGCGATCTCCTTTC ACTTTCCAAAATGAGCCTATTTATATGAATGTGGAAGAACTGCCAAGAGAAAGATTGCCA ATCCCTACTTTTGAGATTAATTTCTTCAAATAAATATATATATATATATATGAACACAAA AGATTGTTCGTTAATTTAAAGTCTTGCTTTATGTTTCTTTTTTTTTTTTTTGATTCATGC TTTATGTTTCATTTCCTAATGTATTTTTTCTTATTTCTGTTTCTTAATAAACTCTCGATA AGTGGAATGTTATATATACTTTTTTTTTAATAAAACGC