Search Result

On this page, GENE INFORMATION displays basic Information about the Gene ID being queried, including the chromosome location, starting and ending locations, plus or minus chain Information, and swissprot functional annotations. In addition, the CDS sequence, protein sequence and promoter sequence of the gene are also shown, and download links are provided.

GeneID Chromosome Start End strand Descript
LITCHI001888Chr53142685431428328-Protein SHORT INTERNODES

Gene ID Start End Accession Domain Type Bit Score E-value
LITCHI001888.m130166PF05142.15DUF702Family185.67.80E-55
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>LITCHI001888.m1
ATGATGATGATGATGATGATGACGACGAGACAAGGCGGAGGTGGAGTTGGAGAGTTGTTG
GGAGGAAGTAGCAGTGGTTCTAGTTGCAGTACAAGATGTCAAGACTGTGGAAACCAAGCA
AAGAAAAATTGTGTTTACATGAGGTGTAGGACTTGTTGTAAGAGAAAAGCGTTTCAATGC
CAAACTCACATCAAAAGCACTTGGATTCCTGCTTATAGAAGGCGCCAGAAGCAACACCAT
CAACAGCATCAGCTCATGGATTCTCCTGTTCATGAACAGCAGCTTCAAGGACTCGGTTAT
AACCCTAAAAGGCTGAGAGAGAATCCCTCTTCAGGGTTAGAAGTAGGGACTTTTCCAGTA
CAAATGAGCTCAGAGGCTATATTTCATTGTGTTAGAGTGAGCTCCATTGATGATGCAATT
GATCAATATGCATATCACACAAGTGTGAACATAGGAGGCCATGTTTTCAAGGGAATTCTC
TATGATCAAGGCCCTGATGGTAACCATAATTACTCTGTTGGTGATAGCTCCTCCAGTGAG
CCCCCACCACCACCACCGCAACATGACTTTCCGGCCGCGCTAACAATTACCACCACCACC
ACCACAAACACCACAACTTGCACCACTTCATCAGATCATCACCAAGCTCTCAATATTCCT
TCTCCATACAATGCATTCCCACTCAATCCTTTCATGTCCGGTATGCAATTTTTCCCTCAT
CCAAAATCTTAG
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>LITCHI001888.m1
MMMMMMMTTRQGGGGVGELLGGSSSGSSCSTRCQDCGNQAKKNCVYMRCRTCCKRKAFQC
QTHIKSTWIPAYRRRQKQHHQQHQLMDSPVHEQQLQGLGYNPKRLRENPSSGLEVGTFPV
QMSSEAIFHCVRVSSIDDAIDQYAYHTSVNIGGHVFKGILYDQGPDGNHNYSVGDSSSSE
PPPPPPQHDFPAALTITTTTTTNTTTCTTSSDHHQALNIPSPYNAFPLNPFMSGMQFFPH
PKS.
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>LITCHI001888.m1
CTCTTTGAAGTAGCTATAATTTTGTATAAAACCAAAAAAATTCCTTCCAGATTATAGTTC
GATGATATATACACACACATACAACAACAGTGTGTGTCTATGTCTACAAAAAGCTGTATA
CGATAACCCCATCAAGCAACAAATCTTCACATGAGCCATGAACTCCACAACAAGAGACTA
CACGACCCATCACCACCACCACCACTACCACTACCACTACTAGCCCATTAAAAACACCCC
CCACCAGCCACCAACTCAACTTACAATAACATATACTACTACATATACCCATCTAACCCC
TCGTTTTGAGTCTAGTTTTCCTAGGAAAATAAATCTTAGTACAACAAAAAAAAATGGGTG
GTGAAGATTGATGATGATGATGATGATGATGACGACGAGACAAGGCGGAGGTGGAGTTGG
AGAGTTGTTGGGAGGAAGTAGCAGTGGTTCTAGTTGCAGTACAAGATGTCAAGACTGTGG
AAACCAAGCAAAGAAAAATTGTGTTTACATGAGGTGTAGGACTTGTTGTAAGAGAAAAGC
GTTTCAATGCCAAACTCACATCAAAAGCACTTGGATTCCTGCTTATAGAAGGCGCCAGAA
GCAACACCATCAACAGCATCAGCTCATGGATTCTCCTGTTCATGAACAGCAGCTTCAAGG
ACTCGGTTATAACCCTAAAAGGCTGAGAGAGAATCCCTCTTCAGGGTTAGAAGTAGGGAC
TTTTCCAGTACAAATGAGCTCAGAGGCTATATTTCATTGTGTTAGAGTGAGCTCCATTGA
TGATGCAATTGATCAATATGCATATCACACAAGTGTGAACATAGGAGGCCATGTTTTCAA
GGGAATTCTCTATGATCAAGGCCCTGATGGTAACCATAATTACTCTGTTGGTGATAGCTC
CTCCAGTGAGCCCCCACCACCACCACCGCAACATGACTTTCCGGCCGCGCTAACAATTAC
CACCACCACCACCACAAACACCACAACTTGCACCACTTCATCAGATCATCACCAAGCTCT
CAATATTCCTTCTCCATACAATGCATTCCCACTCAATCCTTTCATGTCCGGTATGCAATT
TTTCCCTCATCCAAAATCTTAGACTTTGGTTGGTTTGTATTAGAAATAAATAAAAAAGAA
GAAAAAAACAACTTTGTCAAGC
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>LITCHI001888.m1 -  Up_Stream_Len 2000
ATCTCAATTATTTTTTAGATAAGTTTTAATTATATAATATAATAAAAAATAAGTAACAAG
TTTTATGTAAAAAATAATAATAATATTATGTATTTAATAGAAATTAAAATTAAGAACATG
TACGGAGAGAGTATTTAATATGATCCCAAAAAAAGAATTGAGGTGTTACTTGTTTATTAG
ATATTTATAGGAACGGACAGTGGAAATAAAGTACAAGAGAAAGGAGGGAAAGTAAGGATC
TAGGGAGCTGTTGGCAACCATGAAGCCCCACAAATGCCGACCCCTAAAGAGAAGATAAAA
AATAGTCAGAAGCCCCGCTCTTTAAGGGACTGGGACGAATAAATTGCAGTTGTCAGTCAG
TTTGATTGGACTCTCTCACTCAACACTGTGTAAAATTGGAGTGGACCACACAGTGTTTGT
GTCAATTGTGAATGACCGATGAATTTTCCAACACCAATCAACCCATCTCTCTCTCTCTCT
CTCTCTCTCTCTATATATATATGTGTGTGTGTGTGTGTGTGTGGGTGTGACCATATATGA
CTATGTGTCTATATACTAGCTCACTGTTTCAATCATGATATCTATCATCAACATATTACT
TCTAAACATTTGCATCGTTGGTGAAGTCTATTCTTTTCTCTTTTCCACTGCCTCTATCGT
CAAAATGCACGAAGCAATATGTAGTCCTACACGTATCCATGTAATGATCAGTTTCACGTG
GTGAATGGTGATAGCCAGTTACAACTTCTGAAGAGATATGTGAAGGTCCAATGATAATTC
TTGAGGTTTGATTAAAATGTAAATAAGATAATGTTCTTTGTTATTTTTCTATGCTTTGTA
AGTGATAGGGTGATTTTCCATGTATTTGTGTGTGGAATGATATTAAAGAGATTATACATG
TAATCATGGGTTATTATTCTATGTTTTATAAACCACATTAATGATAGTTCAAAGAAAAAA
AAAGCCACAATAATAATTTCTAGCGAACTTCTAACATGAAATCTGTGTATATATAAATAT
ATTTACATGGATTTCATACTTCTATTTAACGGTAAATTTAAAGAAAAAAGAAAATATTCC
AACCTTACTTTTCGAGATTTTGTTAAATCACAGACATAAATATTATTTTTGTTATAAATA
TTAATCCATTCTAAATTTACCTGTAATAGTACTGCACAGACTTTATATCAATATTCTAAT
CAAAGTAATACTAATAAGCATTCAAATTTTATTCCACACAATGTTAACATATCATTCGTA
AAAATTATAAATATAATAAAGATTGATGTGGTCGGTGAAGTGACCTGACAAGCAAACAAT
ATAGTTCACAGCTTTGGTTGAAAATTTTGGGTTAATATAATATTATTCTCAACCAAAGTT
AAAAGAGTATTTTGAATTTTTTTTTACCCAAAGAGAGAATTCATTTTGGTGTCCCTCTTC
TATGCTGTCTGCTGCAGCTGGTAAAGCTAAGACTGAAAGTGTACATGTATTGTCTGTTAG
TGAAAGATAAATTTCATTACCTGAATTATTATTTTTTTTTGAAGAAAAAAAAATTCATTA
CCTGAATTGATTATGTATGTTGCCATGGCGGCGTCGGGATGCTTTAATATTTCTATGTCT
AGTTGTGTGACTCTTTGAAGTAGCTATAATTTTGTATAAAACCAAAAAAATTCCTTCCAG
ATTATAGTTCGATGATATATACACACACATACAACAACAGTGTGTGTCTATGTCTACAAA
AAGCTGTATACGATAACCCCATCAAGCAACAAATCTTCACATGAGCCATGAACTCCACAA
CAAGAGACTACACGACCCATCACCACCACCACCACTACCACTACCACTACTAGCCCATTA
AAAACACCCCCCACCAGCCACCAACTCAACTTACAATAACATATACTACTACATATACCC
ATCTAACCCCTCGTTTTGAGTCTAGTTTTCCTAGGAAAATAAATCTTAGTACAACAAAAA
AAAATGGGTGGTGAAGATTG
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>LITCHI001888.m1 GenomeSequence - 
CTCTTTGAAGTAGCTATAATTTTGTATAAAACCAAAAAAATTCCTTCCAGATTATAGTTC
GATGATATATACACACACATACAACAACAGTGTGTGTCTATGTCTACAAAAAGCTGTATA
CGATAACCCCATCAAGCAACAAATCTTCACATGAGCCATGAACTCCACAACAAGAGACTA
CACGACCCATCACCACCACCACCACTACCACTACCACTACTAGCCCATTAAAAACACCCC
CCACCAGCCACCAACTCAACTTACAATAACATATACTACTACATATACCCATCTAACCCC
TCGTTTTGAGTCTAGTTTTCCTAGGAAAATAAATCTTAGTACAACAAAAAAAAATGGGTG
GTGAAGATTGATGATGATGATGATGATGATGACGACGAGACAAGGCGGAGGTGGAGTTGG
AGAGTTGTTGGGAGGAAGTAGCAGTGGTTCTAGTTGCAGTACAAGATGTCAAGACTGTGG
AAACCAAGCAAAGAAAAATTGTGTTTACATGAGGTGTAGGACTTGTTGTAAGAGAAAAGC
GTTTCAATGCCAAACTCACATCAAAAGCACTTGGATTCCTGCTTATAGAAGGCGCCAGAA
GCAACACCATCAACAGCATCAGCTCATGGATTCTCCTGTTCATGAACAGCAGCTTCAAGG
ACTCGGTTATAACCCTAAAAGGCTGAGAGAGAATCCCTCTTCAGGTACTTTTTATATAAC
ATCATCATATCATATCATTTACTTGGTAGATCTAGTTAAACAGTGACTTGGATTCAACAA
CTCCCTTTCATTTGCTTGTGTTTGATGATGTTATATAATTAATATCCACAGTTGAAACCC
TAGCTACTTGCAGCTTTCTTTTTATTTTAGTTCTATATTACTATATGTTGCTAACAAAAT
ATAGTATGTAAATTTGTTGTGTAATTTTTTTAATTTTTTTTTCACCAAATAGTGATTTGA
TTTGGTTGAGTTGTTGGGGTTTAATGGTTGTGATGTTTTCTGGGGTTTGTTGTATAGGGT
TAGAAGTAGGGACTTTTCCAGTACAAATGAGCTCAGAGGCTATATTTCATTGTGTTAGAG
TGAGCTCCATTGATGATGCAATTGATCAATATGCATATCACACAAGTGTGAACATAGGAG
GCCATGTTTTCAAGGGAATTCTCTATGATCAAGGCCCTGATGGTAACCATAATTACTCTG
TTGGTGATAGCTCCTCCAGTGAGCCCCCACCACCACCACCGCAACATGACTTTCCGGCCG
CGCTAACAATTACCACCACCACCACCACAAACACCACAACTTGCACCACTTCATCAGATC
ATCACCAAGCTCTCAATATTCCTTCTCCATACAATGCATTCCCACTCAATCCTTTCATGT
CCGGTATGCAATTTTTCCCTCATCCAAAATCTTAGACTTTGGTTGGTTTGTATTAGAAAT
AAATAAAAAAGAAGAAAAAAACAACTTTGTCAAGC