Search Result
On this page, GENE INFORMATION displays basic Information about the Gene ID being queried, including the chromosome location, starting and ending locations, plus or minus chain Information, and swissprot functional annotations. In addition, the CDS sequence, protein sequence and promoter sequence of the gene are also shown, and download links are provided.
| GeneID | Chromosome | Start | End | strand | Descript |
| LITCHI001715 | Chr5 | 29860321 | 29863160 | + | B3 domain-containing transcription factor VRN1 |
| Gene ID | Start | End | Accession | Domain | Type | Bit Score | E-value |
| LITCHI001715.m1 | 30 | 105 | PF02362.24 | B3 | Family | 56.5 | 2.10E-15 |
| LITCHI001715.m1 | 282 | 365 | PF02362.24 | B3 | Family | 30.2 | 3.30E-07 |
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>LITCHI001715.m1 ATGATAGGATGTTGGATGGGAAATCAAAGGAAAGGGAAGAAGATGATCGACAGCCTAATG CTTAAGTCATCGCTTCGCTTTTTTACTGAAATTCCTAAAAAGTTTGCAAGGATATTTGGG GATGAACTTTCTACTGTAGCGACACTCACAGTTCCTAATGGTCGAGTTTGGCAAGTGAGG TTGATAAAAGACGGGAGAAAGATTTGGTTTACTGATGGTTGGCATGACTTTGTACAACAC AATTCAATCAGTACTGGGTACTTCTTGGTTTTCAAATATAGAAAAAATACAAACTTTAAA GTTCTTATCTTTGATATGACTGCTTGTGAGATACAATACCCCTACAATGGTAAAGAGCCA GAGAAAGACGAGCAGAACTCATTGCAGCAGGATGAAACTGAGGAAGAAGATTCTGTTGAG ATAATGGACTTTGCAACTCCAAACCCAACTTTTGACTACCTGAAGAGCAAAGCATATGCT AAATGTCCTAGCGCAATGCCATCACATCTGAATCAGGCTAAGACTCCTATTGGTTCTACT TCTGTGAGTCCAAAATTTAAGTGTGGCTGTGAGCCGCAAAACAAGAGGCCTAAATTGGAA GAACCAGCAGAATCACATACAGCAAATGCTGAAGGTATTGACTTAAAGTGCAAGAAAACT GCGTCTAAAGTTGGAACACATTCTTCGGATGAAGCAACAGAAATGGATGAAGATGAGTTT ATGGATTTACTTGAAGAAATGGGAATATGTGTTAATCAGAGATATAGAAGTCTTGCAGCT GAAGAAAGAGATAGAGCAATTGCTGCTGCCAGATTGTTCAAGCCTAAAAATCCTTCATTC ATGGTCATCTTGCGATCTGCTGACGTTAGTCTTCGTCGTGTGTATGTGCCTGCCGATTTT TCTCACAGGTATATAAGTAGGAATGACAAGGTTATCAAAGTACTGGATTGTGATGGAAGG AAGTGGTCCATGGCACTGGCTTGGATGCCTCGATGTTTTATAACAAAATTGGGAAATTTT GCAAAGAATTTGGATGATGGAGATATATGTGTCTTTGAGCTTATTAGAAGGAACACGCTA AAAGTTTCAGTGTTGAAGACAGTGAAAAGTGAGCTGTAG
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>LITCHI001715.m1 MIGCWMGNQRKGKKMIDSLMLKSSLRFFTEIPKKFARIFGDELSTVATLTVPNGRVWQVR LIKDGRKIWFTDGWHDFVQHNSISTGYFLVFKYRKNTNFKVLIFDMTACEIQYPYNGKEP EKDEQNSLQQDETEEEDSVEIMDFATPNPTFDYLKSKAYAKCPSAMPSHLNQAKTPIGST SVSPKFKCGCEPQNKRPKLEEPAESHTANAEGIDLKCKKTASKVGTHSSDEATEMDEDEF MDLLEEMGICVNQRYRSLAAEERDRAIAAARLFKPKNPSFMVILRSADVSLRRVYVPADF SHRYISRNDKVIKVLDCDGRKWSMALAWMPRCFITKLGNFAKNLDDGDICVFELIRRNTL KVSVLKTVKSEL.
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>LITCHI001715.m1 ATGATAGGATGTTGGATGGGAAATCAAAGGAAAGGGAAGAAGATGATCGACAGCCTAATG CTTAAGTCATCGCTTCGCTTTTTTACTGAAATTCCTAAAAAGTTTGCAAGGATATTTGGG GATGAACTTTCTACTGTAGCGACACTCACAGTTCCTAATGGTCGAGTTTGGCAAGTGAGG TTGATAAAAGACGGGAGAAAGATTTGGTTTACTGATGGTTGGCATGACTTTGTACAACAC AATTCAATCAGTACTGGGTACTTCTTGGTTTTCAAATATAGAAAAAATACAAACTTTAAA GTTCTTATCTTTGATATGACTGCTTGTGAGATACAATACCCCTACAATGGTAAAGAGCCA GAGAAAGACGAGCAGAACTCATTGCAGCAGGATGAAACTGAGGAAGAAGATTCTGTTGAG ATAATGGACTTTGCAACTCCAAACCCAACTTTTGACTACCTGAAGAGCAAAGCATATGCT AAATGTCCTAGCGCAATGCCATCACATCTGAATCAGGCTAAGACTCCTATTGGTTCTACT TCTGTGAGTCCAAAATTTAAGTGTGGCTGTGAGCCGCAAAACAAGAGGCCTAAATTGGAA GAACCAGCAGAATCACATACAGCAAATGCTGAAGGTATTGACTTAAAGTGCAAGAAAACT GCGTCTAAAGTTGGAACACATTCTTCGGATGAAGCAACAGAAATGGATGAAGATGAGTTT ATGGATTTACTTGAAGAAATGGGAATATGTGTTAATCAGAGATATAGAAGTCTTGCAGCT GAAGAAAGAGATAGAGCAATTGCTGCTGCCAGATTGTTCAAGCCTAAAAATCCTTCATTC ATGGTCATCTTGCGATCTGCTGACGTTAGTCTTCGTCGTGTGTATGTGCCTGCCGATTTT TCTCACAGGTATATAAGTAGGAATGACAAGGTTATCAAAGTACTGGATTGTGATGGAAGG AAGTGGTCCATGGCACTGGCTTGGATGCCTCGATGTTTTATAACAAAATTGGGAAATTTT GCAAAGAATTTGGATGATGGAGATATATGTGTCTTTGAGCTTATTAGAAGGAACACGCTA AAAGTTTCAGTGTTGAAGACAGTGAAAAGTGAGCTGTAGTGATTAAAAATTCAAGATTTA ACGTTCTTAAATCTTTGTCAGCTATCAGTTTCTTCTTAAACTTTTGTTTACTAATATGAT CATTTTCAAGACAGTTCAATGGTAAATTAAGTATGTTGATAATATATTGTCATTTTAATG TAATGAGTCTGCTTTCTATGTTCTAATTAAATGGAATTGTTTATCATCTTTTTCGTTTTA CATCCTAACATTTTATCTGTGGAGATTAAATTTAGGAATGCAATCATGTGAGCATTTCTT TTATCAATTTTCAGTTCTTTTGGAATAGATCATCCAACAAT
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>LITCHI001715.m1 + Up_Stream_Len 2000 AGAATTTTTTCATGGTATTCTAAAAAGCAAGAAGTCATAGCTCAATCCACAGCAGAAGCA GAATATGTAGCTACTGTTGCTGCTATGAATCAAGCCCTTTAGGTCAGGAAACTCATGACA GATTTGCATATGGAACAACAAGAAGGCACACAAATATTTGTGTACAACCAAGTTGCAATT TCAATTGCTAATAATCCAATGTTCCATGACAAAATAAAACACTTCAAGATAAAGTTTTAT CTTCTAAGAGAGATACAAAGGGAAGGAGAAATGCAGTTAAACTACTACAAAACAGAAAAT CAGAGTGGTGACATCCTAACAAAGGCACTTCCAAAGATTAGATATGAATTCTTGAGGCAG AAGCTTGGTGTATGCAACTTCAGAGTCAAGGAGGAGTGTTGACTGGCATGACTCATGAAG CTGAATCGGTTTTATTTGTTGCTATTCTTTAGGATTATGACCATTTCTTCATGCTATTTT TTAAGCACTTGGTTGTTATGTTCAACATGTAGCAGATTTTTCTGTAATTTGGTTTTCATT ACGCTGTACAAATAGATGGTTGTTGCTTAATAAAATAACAACTTGTGGAGACTCTAAATT AGTCTTTGGTTTTCAAAAATATCCAACAGACCACAACTAGCACCAAAACAGAGTCCTACA GCTTCAAAACAGAAAGCGGCAAAACATAAGCATCACTGTCCGGACATGGTAAGCATATCT ATATTGTACAAACCATATCAAACTTTTTTCAGTCTTTGTGTTGACTACCAGACAAACATT AGACAAGATGGCCTCACTCATTGGCTATCCCTAAACCGTGAGCGAGAGAAAGATGGCCTA TTCATCGAAGTGGTAACTCACTCTTTTTGTTTCTGTTTTCCTCAAATGGCTTCTTGTGTG GCTTTATTTATTGACAATAGGGACATGATGAATTGCCGGTGGTGGCTCTACTCTACTCTG TCTCTAGTCTCTACTGGTGTTGCAGCAGTGGTCAGCGAGTGTGCTTTTTTTCTTTTACAT AAAGTGGACGCGAGATTGGCGGGGAAGCTTGAATAGTGAAGAAGAGACTCCATCAGATTC GGGTAAAAGTATTGAGAGTATGGTTTGGTTTTGACTTTTGGTGTAGGGGATTAATGCTAT AATTGCTCCAGATCAAATGTAGTGGATGTGTGTTAAGTAGAGATATAAGTCAATTAAATG GAGATTAAATTGACTTATCGAATCTAGAAATGATAAGATTAAATGATCAATATGGGCATT GGGCTACACGTGTCTACTAACATTAATGCGAAGGAAGTAGTTAAGCGCTGAAAATGATAG GATGTTGGATGGGAAAGCGAAGGAAAGGGAGAAGATGGTTGACAGCCTATCGCTTAAGTC ATTGTATCGCTTCTTTATTCATCACCGTACCATCTTATTTTCTTTGTTCGCTTCTATTCA TTAGACATCTTTTCTACAAACAATTATTAAACATTTTAATTACTTCTCTACCCTTTTTAA ACAAATATAAACAGCTTAATATATGAGGATAAAAATGTAATTTTATTTTGAAACAAATGT TGGGTGTGGAATCTAGAAATGATGATGAAAATAAGATTACATGATCAATATGGGCATTGG GCTACAAGTGTCTACTAACATTAATGTGAAGGGATTAGTTAAGCGCTGAAAATGATAGGA TGTTGGATGGGAAAGCGAAGGAAAGGGGAGAAGATGGTTGACAGCCTATCGCTTAAGTCA TTGTATCGCTTCTTTATTCATCACCGTACCATCTTATTTTCTTTGTTCGCTTCTATTCAT CGGACCTCTTTTCTACAAACAATTATTAAACATTTTAATTACTTCTCTACCCTTTTTAAA CAAATATAAACAGCTTAATATATGAGGATAAAAATGTAATTTTATTTTGAAACAAATGTT TGATGAAAATAAGATTACATGGGCATTGGGCTACAAGTGTCTACTAACATTAATGTGAAG GAATTAGTTAAGCGCTGAAA
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>LITCHI001715.m1 GenomeSequence + ATGATAGGATGTTGGATGGGAAATCAAAGGAAAGGGAAGAAGATGATCGACAGCCTAATG CTTAAGTCATCGCTTCGCTTTTTTACTGTAAGATTCATCACTATACCATATTACTTTTCT CTATTCACTTCTATTCATCCGACCTCTTCGACTACAAATAACTATTAAATATTTTAACTA TGTCTCCACCCTTTTTAAACAAATACAAACAACTTAATATAGGAGGATAAAAATGTAATT TTACTTTCAAACAAATATTGGGTGTGGAATTTTATATTATTCACGATCCACTTCCCATTT TTTATATATAGTTGATAGATATACGTGTTTATTATGTGTTTCATGTTTGCATGCTATTAT GCTAAAGTGAATTGCAAGAAGCAACTGGTTTTTATATACCTCTCTGCAACAACAAGAAGT TTGGTGTTAGAAGTCTACGGAGATGGCGGACACACCCCAAAACTTTTTCAAGGTCATTCT TGCTTCTACTCTTGAAGACAAGAAACTGGTACACCCCACAACTTCTATTTCTGATTTTTC AAGCTTCGTTTTGCTTGAGTTTTACGTTGCTGTCCAAATTTGGCTTTGCTTCATGTTTCG ATGGATTTTGCTTGTAATATGGAAGTTTGGTGCTTTTCTCTTTTGTGATCAATGCTACAC TATGTTCAAAATATTACTCCAGAATATTAAGTGTTGCACTAGTTTCAGTCACTTTAGTTT GGCACTTACAAGGTTTCTAGATCTTACTGAAACACTAAGAAGTGATTATTTTGTGTTAAA CTTTTAGTTGCATGCTATCATGATTATAGTTCAATGACTTTTGAATTCATTTTACTGTAA CTGTTGAGCAAACAAATTTATTTTTACACCCAATTAAGCATACAGATTAGTGCACTTCTA TATGATGTTATATATGCTGTTTTAAATAAATATTGTGCTGTGGTGAGTTGTTAAGCTAGT GAAGAGTTTTGATGAAATTTACTGATGGTTTTTGCATGGTTTTTGCATGTCTTTGCTTCA GAAAGAAGGAAAAAAAAACCTTCAATTACTACAATCTTCTTGAGTCTCATTTCATTATTG AAGACATTGTTTCGTTGCCTTTGCCAAATAGAGCTTAACATGTGTTGTCCTTGGTCTGCT TCTGCATATTATTGCACTTTCTTGTTTATCAAGAAATCACATGAAAAACATCATTTTGGT TGTATGGTACAAACATGTCTCTTCTTGTTCCTATGATGTTGATCTAGACTGATTAAAACT ACAATAGCAATCTCATCAAGCCTTTTCTTTGATCCAATTTCACTTGTTTTCCAATAAACG TCTAACTTTATTTGCATGATATAGGAAATTCCTAAAAAGTTTGCAAGGATATTTGGGGAT GAACTTTCTACTGTAGCGACACTCACAGTTCCTAATGGTCGAGTTTGGCAAGTGAGGTTG ATAAAAGACGGGAGAAAGATTTGGTTTACTGATGGTTGGCATGACTTTGTACAACACAAT TCAATCAGTACTGGGTACTTCTTGGTTTTCAAATATAGAAAAAATACAAACTTTAAAGTT CTTATCTTTGATATGACTGCTTGTGAGATACAATACCCCTACAATGGTAAAGAGCCAGAG AAAGACGAGCAGAACTCATTGCAGCAGGATGAAACTGAGGAAGAAGATTCTGTTGAGATA ATGGACTTTGCAACTCCAAACCCAACTTTTGACTACCTGAAGAGCAAAGCATATGCTAAA TGTCCTAGCGCAATGCCATCACATCTGAATCAGGCTAAGACTCCTATTGGTTCTACTTCT GTGAGTCCAAAATTTAAGTGTGGCTGTGAGCCGCAAAACAAGAGGCCTAAATTGGAAGAA CCAGCAGAATCACATACAGCAAATGCTGAAGGTATTGACTTAAAGTGCAAGAAAACTGCG TCTAAAGTTGGAACACATTCTTCGGATGAAGCAACAGAAATGGGTAATTTTTTTTCCGTT TGTGGCTGGTCAGTGCTTGGTCTTTAGTAAAATTTATGTTTTTATAAGTCTAAATTCCTT GATTGTAGATGAAGATGAGTTTATGGATTTACTTGAAGAAATGGGAATATGTGTTAATCA GAGATATAGAAGTCTTGCAGCTGAAGAAAGAGATAGAGCAATTGCTGCTGCCAGATTGTT CAAGCCTAAAAATCCTTCATTCATGGTCATCTTGCGATCTGCTGACGTTAGTCTTCGTCG TGTGGTAAGTTCCTTTAATGTGATCATGAAGTTTTTCACATCAATTTTTTTAGCTTAATG TTAACATTTTTGCTAGTGCAGTATGTGCCTGCCGATTTTTCTCACAGGTATATAAGTAGG AATGACAAGGTTATCAAAGTACTGGATTGTGATGGAAGGAAGTGGTCCATGGCACTGGCT TGGATGCCTCGATGTTTTATAACAAAATTGGGAAATTTTGCAAAGAATTTGGATGATGGA GATATATGTGTCTTTGAGCTTATTAGAAGGAACACGCTAAAAGTTTCAGTGTTGAAGACA GTGAAAAGTGAGCTGTAGTGATTAAAAATTCAAGATTTAACGTTCTTAAATCTTTGTCAG CTATCAGTTTCTTCTTAAACTTTTGTTTACTAATATGATCATTTTCAAGACAGTTCAATG GTAAATTAAGTATGTTGATAATATATTGTCATTTTAATGTAATGAGTCTGCTTTCTATGT TCTAATTAAATGGAATTGTTTATCATCTTTTTCGTTTTACATCCTAACATTTTATCTGTG GAGATTAAATTTAGGAATGCAATCATGTGAGCATTTCTTTTATCAATTTTCAGTTCTTTT GGAATAGATCATCCAACAAT