Search Result
On this page, GENE INFORMATION displays basic Information about the Gene ID being queried, including the chromosome location, starting and ending locations, plus or minus chain Information, and swissprot functional annotations. In addition, the CDS sequence, protein sequence and promoter sequence of the gene are also shown, and download links are provided.
| GeneID | Chromosome | Start | End | strand | Descript |
| LITCHI001712 | Chr5 | 29823836 | 29826072 | + | B3 domain-containing transcription factor VRN1 |
| Gene ID | Start | End | Accession | Domain | Type | Bit Score | E-value |
| LITCHI001712.m1 | 29 | 111 | PF02362.24 | B3 | Family | 39.6 | 4.00E-10 |
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>LITCHI001712.m1 ATGGCCTCCAGCAGTAAAACAGAACCAAATGCGTTGAATCCTATGGCAGGTACACATTCA CATTTCTACAAGATTATTCTACCTGAAACTATTGCAGACAACAAGCTGAGGATCCCTGAA AAGTTTGTGAGGGAATTTGGGGATGAACCATCTGCTTTTGTTAGACTCATTGTTCCAAAT GGTCAAGTTTGGCATGTGGGGTTGATGAAATGTAGGACAAAAGTTTGTTTTCATGATGGT TGGCATGACTTTATTGAATACTATTCAATCACTGCTGGATATGTTTTGCTTTTCAAATAC GAGAACAACTCAAAGTTTTATGTCGTTGTATTTAACTTGAACGCGTGTGAGATTCAGTAT CCTGTGAAGAACCAGGAAAAAGGTACCAGCAGAAATCAGTACACCAAGTTGACATGGAAA CTTATAGTTCTGTGGAGAAAAACTTTCCAAATAAATGTCAAGCAGCTTCAAGTGGTGCAA AAAGGAGACGTAGAGGAAAAGCTAGGGGTGTTGCTTGTCGTGCACGTGACTTGGAAGTAT CTATATATCAAGGAAGGTACGGAGGAGGATCTTAAGGCTGCATTCAATAGAGCAGTTTCG AATAATATGTATACAAACTGGATGTTTCGGTTGAGAAAGCCTATTTTCGAAAAGTACAAA TCTCCGGAAGATCACATTGCTCATCCACCAAATAATGTGTCTCCAGTCGTATGGAAACTA ATGGTTGACAAATGGACGGATGAAAAGTGGCAGCTTAAAGAAAATGGAGTTGAACCTAGT CCAATTGAATGCTTTAAAAAGTTCAACATGTCAAATCCAAAGGGTGGTGGAGAGAAGTGC TGGACTACTGAGAAAGCAAAAGAATTGCATGAAAAAATGGAAACTAAGAAGAAATCAATT ACTGCGAATCAAGATTCTGAAATAGATGAGTGGGATACATATCATGAAGTAGTTGGAGAA GCATCTCATGATCACATTCTTGGTATGGGAAGATGCATTAGGCTTGAGGATGTGTATGGT CCACAAGGAAGTTATAAGCGTGCTAGAGTTGATAGAACAGCAGCATTAGAAGTGAAGATT AAAAGTATGGAAGAAGAAATGAAGCAAATGCGTGAGCTGATAAATGCATGGTCATGTTCA TGA
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>LITCHI001712.m1 MASSSKTEPNALNPMAGTHSHFYKIILPETIADNKLRIPEKFVREFGDEPSAFVRLIVPN GQVWHVGLMKCRTKVCFHDGWHDFIEYYSITAGYVLLFKYENNSKFYVVVFNLNACEIQY PVKNQEKGTSRNQYTKLTWKLIVLWRKTFQINVKQLQVVQKGDVEEKLGVLLVVHVTWKY LYIKEGTEEDLKAAFNRAVSNNMYTNWMFRLRKPIFEKYKSPEDHIAHPPNNVSPVVWKL MVDKWTDEKWQLKENGVEPSPIECFKKFNMSNPKGGGEKCWTTEKAKELHEKMETKKKSI TANQDSEIDEWDTYHEVVGEASHDHILGMGRCIRLEDVYGPQGSYKRARVDRTAALEVKI KSMEEEMKQMRELINAWSCS.
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>LITCHI001712.m1 ATGGCCTCCAGCAGTAAAACAGAACCAAATGCGTTGAATCCTATGGCAGGTACACATTCA CATTTCTACAAGATTATTCTACCTGAAACTATTGCAGACAACAAGCTGAGGATCCCTGAA AAGTTTGTGAGGGAATTTGGGGATGAACCATCTGCTTTTGTTAGACTCATTGTTCCAAAT GGTCAAGTTTGGCATGTGGGGTTGATGAAATGTAGGACAAAAGTTTGTTTTCATGATGGT TGGCATGACTTTATTGAATACTATTCAATCACTGCTGGATATGTTTTGCTTTTCAAATAC GAGAACAACTCAAAGTTTTATGTCGTTGTATTTAACTTGAACGCGTGTGAGATTCAGTAT CCTGTGAAGAACCAGGAAAAAGGTACCAGCAGAAATCAGTACACCAAGTTGACATGGAAA CTTATAGTTCTGTGGAGAAAAACTTTCCAAATAAATGTCAAGCAGCTTCAAGTGGTGCAA AAAGGAGACGTAGAGGAAAAGCTAGGGGTGTTGCTTGTCGTGCACGTGACTTGGAAGTAT CTATATATCAAGGAAGGTACGGAGGAGGATCTTAAGGCTGCATTCAATAGAGCAGTTTCG AATAATATGTATACAAACTGGATGTTTCGGTTGAGAAAGCCTATTTTCGAAAAGTACAAA TCTCCGGAAGATCACATTGCTCATCCACCAAATAATGTGTCTCCAGTCGTATGGAAACTA ATGGTTGACAAATGGACGGATGAAAAGTGGCAGCTTAAAGAAAATGGAGTTGAACCTAGT CCAATTGAATGCTTTAAAAAGTTCAACATGTCAAATCCAAAGGGTGGTGGAGAGAAGTGC TGGACTACTGAGAAAGCAAAAGAATTGCATGAAAAAATGGAAACTAAGAAGAAATCAATT ACTGCGAATCAAGATTCTGAAATAGATGAGTGGGATACATATCATGAAGTAGTTGGAGAA GCATCTCATGATCACATTCTTGGTATGGGAAGATGCATTAGGCTTGAGGATGTGTATGGT CCACAAGGAAGTTATAAGCGTGCTAGAGTTGATAGAACAGCAGCATTAGAAGTGAAGATT AAAAGTATGGAAGAAGAAATGAAGCAAATGCGTGAGCTGATAAATGCATGGTCATGTTCA TGA
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>LITCHI001712.m1 + Up_Stream_Len 2000 GAGCTCCATCCTGCTAGCTGAGCTAGAGGCTGAGCTAGCTGCGAGCTGGAGCTGCGAGTT GAGAGCTGAGAGCTGCGAGCCGAGCTAGTTGAGAGCTGAGGAGCTGGATGCTGAGCTAGC TGAGAGCTGAGGAGCTGGATGCTGAGCTAGCTGTCAGTCTGAGAGCTGCGACCTGGCGAC CTGACGAGCTGGCGAGCTGGGAGCTACAACCTGCGAGCTGAGCTGAGCTAGCTGAGAGTT GGATGTTGAGCTAGCTGAGGAGCTGGATGCTGAGCTAGCTGGAGCTGTGCTGAGAGCTGA GACCTGAGAGCTGACCTGACCTGAGAGCTGGCTGAGCTGAGAGCTGCGACCTGCGAGCTG AGCTAGCTGAGAGCTGAGGAGCTGGATGTTGAGCTAGCTGAGAGCTGAGGAGCTGGATGC TGAGCTAGCTGAGAGCTGAGGAGCTGGATGTTGAGCTAGCTGAGAGCTGAGAAGCTGGAT GCTGAGCTAGCTGAGAGCTGAGGAGCTGGATGTTGAGCTAGCTGAGAGCTGCGACCTGGC GAGCTGGCGAGTTGAGAAGCTGCAAGAGCTGAGCTAGCTGAGCGAGCTGAGGAGCTGCGA CCTGCGAGCTGAGCTAGCTGAGAGCTGGGCCAGCCTATTTGATTGGTTCTTTGTGCTTTT ACCAGCCTATTTTTACAGTCCCAAAAATAGGTATAACAACTACGATATAATTTTTTAGCC ACAATATTATTTATTAATCACGCCATGGCCAACAATTTTAGGGGATTGTCTGTATAATTA ATAAATAATTACATATGTGTATAATATGACAAAACTTTAGGAATATGCATGTAATTCGCG AAAAAACAAGCCATTGTCAGTCTCTGCGTGTACATGCTGACTGGTGCAAGCATTTCCATT ATCTCCTGTCAACATGCTGACCGGCGCAAGTTTTTCCATTTTATCCTGTCAACATCTATC TCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTTTG TGTTTTGACCAGCAAAATGGTACTAGACTCCCTCACTTTTAATCACTTATTGTTCTAGTG TTTGGTTGCGAATTGAAGTGATTTATCAAAAATCTGAAACCAAAAACAAGCAACTGGTTT TCTGTACTCTGCATGCAACAACACAAACCATCACATGCTCTTCGGCACCATAGAGTAGGA GAAGGGCAGACTGTGACTCCACTAAAAGAACCAGTTTTGGTCTAAAAAGTTGATTAGAGA GAAGAGATAGACACCCTTGTGACTGTTGACCTTGAGTTGTTGCACCCTTCTCTCCGGTCA TGTTCTCTTAAAAAATTCTGAGTGTTAGTTTAATGCCAGGACAAACGTCTGATATATTGA CTTGTAAAGATCTGCTAAAGTTCATCTATATTTTTCATCTGTATTTTTCTTTTGTTGGTA ATGATTATAATTCTAACAGAACAGCATTCCAGGTGAAGTGGCCGAGCTCCTTGTAGTTGT GTCTAGAGTTGCAAGGCCTTTCAAAATTAAAATGAAAGCCATGCAACATTCAAACAGTGA AAAGATAGAGAGAAAAAAAAAAGGTTGAAATTGGTCTCATTATGTGGTGTCTGACGTCAA TTCTAATATAAAGCCTTTCTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTAATTAAACTA GACTTTTTTATAAATATAATATGGCACGGAAAGTTTGATATCATAATGTTCCAGTCAAGA ATTAAACATCAAACGCTTAAGTTTAGTTTCTCCATATAGTTTGACTCAAACATTTTGGCA TTTGAATCTGTGTAAAAGTTGATGCATTGAACCTACATTAATTACCATATTTGTACATGG AACTTGATCTATCTTTTGTAACAAGTTATTTAATTAGAAGACCAAAGATCACAAACGATG CAGCAGATAAAGATTTTCTGAGGCACAAATTCCCCACCCTTGTCACAACAGAAACCATCC GATTTTCTCAAACAAAACAA
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>LITCHI001712.m1 GenomeSequence + ATGGCCTCCAGCAGTAAAACAGAACCAAATGCGTTGAATCCTATGGCAGGTACACATTCA CATTTCTACAAGATTATTCTACCTGAAACTATTGCAGACAACAAGCTGGTAATTCACACA ACTCTCGCTTCTTTGTTGTATTTGTACAAGCGCATATGTCATTGTTTTGGTAATATATCT CATTGTTTTGGTAATGTTAATCTTTACAGATTAATTGGATCTAGGACAGCAGTTTTCCTG AAGTAGGGTCTTTTTTTTTTTTTATAAAATAATTTTAATATACTTCTTTATGAATTGATC TTTTGACATGATTGTATGCACGATTGCAGAGGATCCCTGAAAAGTTTGTGAGGGAATTTG GGGATGAACCATCTGCTTTTGTTAGACTCATTGTTCCAAATGGTCAAGTTTGGCATGTGG GGTTGATGAAATGTAGGACAAAAGTTTGTTTTCATGATGGTTGGCATGACTTTATTGAAT ACTATTCAATCACTGCTGGATATGTTTTGCTTTTCAAATACGAGAACAACTCAAAGTTTT ATGTCGTTGTATTTAACTTGAACGCGTGTGAGATTCAGTATCCTGTGAAGAACCAGGAAA AAGGTACCAGCAGAAATCAGTACACCAAGTTGACATGGAAACTTATAGTTCTGTGGAGAA AAACTTTCCAAATAAATGTCAAGGTAAAATTAAAGGACATAGATCGCAAATGGTACAAAT TTAAATTTGTTGTAATGCCCAAATTGACTGAACTATTATGTTTTTCTTTGAATTTGTAGC AGCTTCAAGTGGTGCAAAAAGGAGACGTAGAGGAAAAGCTAGGGGTGTTGCTTGTCGTGC ACGTGACTTGGAAGTATCTATATATCAAGGAAGGTAAATTCTCAGTTTTGAGATACATAA TGTCTTAGGAAAATAGTTATATGACAATCAAATTGGAATTAGCGTTTATTTTTTTGTCTA AGACTAAATAGATTTTATGTTTGTCTTCTGAATATAAATATTTTAAATATTTTAAAGTTG GTAATAACCCTACTTTACTCTTTCAACTGTAAATTGCCTATATGTCAGAATTTTAAATCA GTGGCCAAGGAAATTCATGTAACTAACAACCTTTAACTTATCAGGATAGTCACACCACAC TTGAGGTTGTTAGGGAAATATCTATTATCTTCTTCCAAAATATTACAGGACCTTGGATAA GATATACTGAATATGAGAATATCCGGAGGAAGAACGCGAAATATTATTTGCACGCTTCAA ACGAATTCAGTTTCGTTACACAGGTACGGAGGAGGATCTTAAGGCTGCATTCAATAGAGC AGTTTCGAATAATATGTATACAAACTGGATGTTTCGGTTGAGAAAGCCTATTTTCGAAAA GTACAAATCTCCGGAAGATCACATTGCTCATCCACCAAATAATGTGTCTCCAGTCGTATG GAAACTAATGGTTGACAAATGGACGGATGAAAAGTGGCAGGTAATATGTGGAAATAAACA AACTAATCTTCATATATATTTACACATTCTTATATATATTGATAAATTCTAAGACGGTAT GTGTAGGACCTAAGCAAGAAAAACGCGAATAGTCAATCAAATGTGAAAATGCATCATACA TAGGTTCAATTTCATTTGCAAAGTATAAATATGAACAGGTACTCACATACATACACATTC TTATATCATGAATGCTCACTGTTAAATCTTTGACAAGAAAAACTCATGTTTAATTACTTT GTGGGTGTAGCTTAAAGAAAATGGAGTTGAACCTAGTCCAATTGAATGCTTTAAAAAGTT CAACATGTCAAATCCAAAGGGTGGTGGAGAGAAGTGCTGGACTACTGAGAAAGCAAAAGA ATTGCATGTATGTATATAATGTCATATATACATGTAATATATTTTTTCAAATTTTATTAT GTAAGTGTACTTGTAATTATATGTTGTTACAAATTATAATGCAGGAAAAAATGGAAACTA AGAAGAAATCAATTACTGCGAATCAAGATTCTGAAATAGATGAGTGGGATACATATCATG AAGTAGTTGGAGAAGCATCTCATGATCACATTCTTGGTATGGGAAGATGCATTAGGCTTG AGGATGTGTATGGTCCACAAGGAAGTTATAAGCGTGCTAGAGTTGATAGAACAGCAGCAT TAGAAGTGAAGATTAAAAGTATGGAAGAAGAAATGAAGCAAATGCGTGAGCTGATAAATG CATGGTCATGTTCATGA