Gene Location Viewer
In "Gene Location Viewer" function, user can map the chromosomal distribution of genes in the six sapindaceae species that are included in the database. The user needs to select a species and specify which genes to display, one gene per line, in the format of "FeatureName,ChrID,StartPos,EndPos" or input the Gene ID. In addition, the user can set the genes to be highlighted, one gene per line (optional).
Gene Location Viewer
First, you need to specify the species for which you want to map the distribution of genes on the chromosomes. Then, input a list of genes that need to be plotted (single gene or multiple genes). "Gene Location Viewer" supports two input modes:
- Mode 1: input the gene name, chromosome ID, start position, and end position (e.g. MYB12,Chr1,1599787,1602178). Note the use of commas as delimiters, one data per line. For example:
xMYB12,Chr1,1599787,1602178MYB2,Chr1,9684799,9686132MYB15,Chr1,11344679,11346570MYB36,Chr1,33952672,33954239MYB74,Chr10,1997395,2009458MYB26,Chr10,3248427,3250585MYB35,Chr10,4678448,4680660MYB86,Chr10,6323389,6325364MYB63,Chr12,20216165,20218100MYB80,Chr12,22447846,22448554MYB59,Chr13,20577086,20578594MYB119,Chr13,22774869,22777098MYB88,Chr14,7012728,7023732MYB72,Chr15,1438550,1440928MYB1,Chr15,4363196,4367713MYB27,Chr15,7756763,7757909MYB306,Chr15,19921078,19923547MYB97,Chr2,37209478,37212491MYB61,Chr3,12372100,12374632MYB8,Chr4,3924111,3926118
- Mode 2: Directly input the Gene ID, and the program may automatically obtain the coordinates of the input gene and draw them. For example:
xxxxxxxxxxLITCHI002020LITCHI002021LITCHI002022LITCHI002023LITCHI002024LITCHI002025LITCHI002026
Output file format
